myRT

myRT report for GCA_001431425.1_ASM143142v1

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Seq: LDJG01000003.1 Stenotrophomonas nitritireducens strain DSM 12575 contig_3, whole genome shotgun sequence (322412 bp)
Overview 1 RT 1: 118909-128412 bp Neighborhood of RT #1 [118909, 128412] PhoE RVT-Retrons ABC_ATPase Feature: gene Location: 118909-119532 bp Ori: KRG60408.1 Feature: domain Description: PhoE Location: 118918-119422 bp Feature: domain Description: PhoE Location: 1 1 891 8-1 1 9422 bp Feature: gene Location: 119920-124410 bp Feature: gene Location: 124914-125870 bp Ori: KRG60238.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125028-125577 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 25028-1 25577 bp Feature: gene Location: 125867-127204 bp Ori: KRG60239.1 Feature: domain Description: ABC_ATPase Location: 125924-126656 bp Feature: domain Description: ABC_ATPase Location: 1 25924-1 26656 bp Feature: gene Location: 127813-128412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhoE (COG0406), RVT-Retrons, ABC_ATPase (pfam09818)

Seq: LDJG01000036.1 Stenotrophomonas nitritireducens strain DSM 12575 contig_36, whole genome shotgun sequence (26622 bp)
Overview 1 RT 1: 156-2641 bp Neighborhood of RT #1 [156, 2658] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 156-377 bp Feature: gene Location: 367-1755 bp Ori: KRG54079.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 724-1420 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 72 4-142 0 bp Feature: gene Location: 1752-2198 bp Ori: KRG54080.1 Feature: domain Description: Avd_like Location: 1776-2088 bp Feature: domain Description: Avd_like Location: 1776-2 088 bp Feature: gene Location: 2230-2658 bp Ori: KRG54081.1 Feature: domain Description: DUF1566 Location: 2272-2641 bp Feature: domain Description: DUF1566 Location: 2 2 72 -2 641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)