myRT

myRT report for GCA_001432525.1_ASM143252v1

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Seq: LLCX01000042.1 Acinetobacter baumannii strain ABBL017 contig-21, whole genome shotgun sequence (3354 bp)
Overview 1 RT 1: 1-2937 bp Neighborhood of RT #1 [1, 3023] ligand_gated_channel RVT-Retrons COG3950 Feature: gene Location: 1-419 bp Feature: gene Location: 736-951 bp Feature: domain Description: ligand_gated_channel Location: 742-949 bp Feature: domain Description: ligand_gated_channel Location: 742-949 bp Feature: gene Location: 1674-2549 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1713-2313 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 71 3-231 3 bp Feature: gene Location: 2550-3023 bp Feature: domain Description: COG3950 Location: 2724-2937 bp Feature: domain Description: COG3950 Location: 2724-2937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), ligand_gated_channel (cd01347)

Seq: LLCX01000081.1 Acinetobacter baumannii strain ABBL017 contig-68, whole genome shotgun sequence (164174 bp)
Overview 1 RT 1: 84226-89791 bp Neighborhood of RT #1 [84226, 89847] TetR_N RVT-Retrons PaaD PaaY Feature: gene Location: 84226-84828 bp Feature: domain Description: TetR_N Location: 84274-84397 bp Feature: domain Description: TetR_N Location: 842 74-84397 bp Feature: gene Location: 85816-87042 bp Feature: gene Location: 87248-88420 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87503-88157 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87503-88157 bp Feature: gene Location: 88781-89164 bp Feature: domain Description: PaaD Location: 88823-89156 bp Feature: domain Description: PaaD Location: 8882 3-89156 bp Feature: gene Location: 89242-89847 bp Feature: domain Description: PaaY Location: 89251-89791 bp Feature: domain Description: PaaY Location: 892 51-89791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), RVT-Retrons, PaaD (TIGR02286), PaaY (TIGR02287)