myRT

myRT report for GCA_001432925.1_ASM143292v1

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Seq: LLDK01000017.1 Acinetobacter baumannii strain ABBL030 contig-1000021, whole genome shotgun sequence (78842 bp)
Overview 1 RT 1: 73501-78691 bp Neighborhood of RT #1 [73501, 78842] PaaY PaaD RVT-Retrons TetR_N Feature: gene Location: 73501-74106 bp Feature: domain Description: PaaY Location: 73510-74050 bp Feature: domain Description: PaaY Location: 7351 0-74050 bp Feature: gene Location: 74184-74567 bp Feature: domain Description: PaaD Location: 74226-74559 bp Feature: domain Description: PaaD Location: 74226-74559 bp Feature: gene Location: 74928-76100 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 75183-75837 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 751 83-75837 bp Feature: gene Location: 76306-77532 bp Feature: gene Location: 78520-78842 bp Feature: domain Description: TetR_N Location: 78565-78691 bp Feature: domain Description: TetR_N Location: 78565-78691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PaaY (TIGR02287), PaaD (TIGR02286), RVT-Retrons, TetR_N (pfam00440)

Seq: LLDK01000189.1 Acinetobacter baumannii strain ABBL030 contig-7, whole genome shotgun sequence (133017 bp)
Overview 1 RT 1: 64-6210 bp Neighborhood of RT #1 [64, 6383] DDE_Tnp_4 CirA RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 64-327 bp Feature: domain Description: DDE_Tnp_4 Location: 67-310 bp Feature: domain Description: DDE_Tnp_4 Location: 67-310 bp Feature: gene Location: 405-2594 bp Feature: domain Description: CirA Location: 498-2592 bp Feature: domain Description: CirA Location: 498-2 592 bp Feature: gene Location: 3317-4192 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3356-3956 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3356-3956 bp Feature: gene Location: 4193-5737 bp Feature: domain Description: COG3950 Location: 4367-5516 bp Feature: domain Description: COG3950 Location: 4367-5516 bp Feature: gene Location: 5742-6383 bp Feature: domain Description: TIGR02646 Location: 5841-6210 bp Feature: domain Description: TIGR02 646 Location: 5841-62 10 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CirA (COG1629), COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein), DDE_Tnp_4 (pfam13359)