myRT

myRT report for GCA_001433015.1_ASM143301v1

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Seq: LLDY01000150.1 Acinetobacter baumannii strain ABBL044 contig-56, whole genome shotgun sequence (61985 bp)
Overview 1 RT 1: 255-4230 bp Neighborhood of RT #1 [255, 4286] RVT-Retrons PaaD PaaY Feature: gene Location: 255-1481 bp Feature: gene Location: 1687-2859 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1942-2596 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 942-2596 bp Feature: gene Location: 3220-3603 bp Feature: domain Description: PaaD Location: 3262-3595 bp Feature: domain Description: PaaD Location: 3262-3595 bp Feature: gene Location: 3681-4286 bp Feature: domain Description: PaaY Location: 3690-4230 bp Feature: domain Description: PaaY Location: 3690-4230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PaaD (TIGR02286), PaaY (TIGR02287)

Seq: LLDY01000030.1 Acinetobacter baumannii strain ABBL044 contig-1000050, whole genome shotgun sequence (28239 bp)
Overview 1 RT 1: 21962-28222 bp Neighborhood of RT #1 [21962, 28239] TIGR02646 COG3950 RVT-Retrons CirA DDE_Tnp_4 Feature: gene Location: 21962-22603 bp Feature: domain Description: TIGR02646 Location: 22061-22430 bp Feature: domain Description: TIGR02 646 Location: 2 2 061-2 2 430 bp Feature: gene Location: 22608-24152 bp Feature: domain Description: COG3950 Location: 22782-23931 bp Feature: domain Description: COG3950 Location: 2 2 782 -2 3931 bp Feature: gene Location: 24153-25028 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24192-24792 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 4192 -2 4792 bp Feature: gene Location: 25751-27940 bp Feature: domain Description: CirA Location: 25844-27938 bp Feature: domain Description: CirA Location: 2 5844-2 7938 bp Feature: gene Location: 28018-28239 bp Feature: domain Description: DDE_Tnp_4 Location: 28024-28222 bp Feature: domain Description: DDE_Tnp_4 Location: 2 802 4-2 82 2 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, CirA (COG1629), DDE_Tnp_4 (pfam13359)