myRT

myRT report for GCA_001433245.1_ASM143324v1

Download annotations/find similar RTs

Seq: LLED01000016.1 Acinetobacter baumannii strain ABBL049 contig-1000028, whole genome shotgun sequence (233024 bp)
Overview 1 RT 1: 126335-129165 bp Neighborhood of RT #1 [126335, 129401] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 126335-126976 bp Ori: KRJ78834.1 Feature: domain Description: TIGR02646 Location: 126434-126803 bp Feature: domain Description: TIGR02646 Location: 1 26434-1 26803 bp Feature: gene Location: 126981-128525 bp Ori: KRJ78835.1 Feature: domain Description: COG3950 Location: 127155-128304 bp Feature: domain Description: COG3950 Location: 1 271 55-1 28304 bp Feature: gene Location: 128526-129401 bp Ori: KRJ78922.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 128565-129165 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 28565-1 291 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons

Seq: LLED01000036.1 Acinetobacter baumannii strain ABBL049 contig-1000068, whole genome shotgun sequence (184621 bp)
Overview 1 RT 1: 84442-90007 bp Neighborhood of RT #1 [84442, 90063] TetR_N RVT-Retrons PaaD PaaY Feature: gene Location: 84442-85044 bp Ori: KRJ77822.1 Feature: domain Description: TetR_N Location: 84490-84613 bp Feature: domain Description: TetR_N Location: 84490-84613 bp Feature: gene Location: 86032-87258 bp Feature: gene Location: 87464-88636 bp Ori: KRJ77824.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87719-88370 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87719-88370 bp Feature: gene Location: 88997-89380 bp Ori: KRJ77825.1 Feature: domain Description: PaaD Location: 89039-89372 bp Feature: domain Description: PaaD Location: 89039-89372 bp Feature: gene Location: 89458-90063 bp Ori: KRJ77826.1 Feature: domain Description: PaaY Location: 89467-90007 bp Feature: domain Description: PaaY Location: 89467-90007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), RVT-Retrons, PaaD (TIGR02286), PaaY (TIGR02287)