myRT

myRT report for GCA_001433695.1_ASM143369v1

Download annotations/find similar RTs

Seq: LLEH01000022.1 Acinetobacter baumannii strain ABBL053 contig-1000077, whole genome shotgun sequence (99005 bp)
Overview 1 RT 1: 1-4341 bp Neighborhood of RT #1 [1, 4397] HTH_Tnp_4 RVT-Retrons PaaD PaaY Feature: gene Location: 1-231 bp Feature: domain Description: HTH_Tnp_4 Location: 139-229 bp Feature: domain Description: HTH_Tnp_4 Location: 1 39-229 bp Feature: gene Location: 366-1592 bp Feature: gene Location: 1798-2970 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2053-2707 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2053-2707 bp Feature: gene Location: 3331-3714 bp Feature: domain Description: PaaD Location: 3373-3706 bp Feature: domain Description: PaaD Location: 3373-3706 bp Feature: gene Location: 3792-4397 bp Feature: domain Description: PaaY Location: 3801-4341 bp Feature: domain Description: PaaY Location: 3801 -4341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_4 (pfam13613), RVT-Retrons, PaaD (TIGR02286)

Seq: LLEH01000074.1 Acinetobacter baumannii strain ABBL053 contig-64, whole genome shotgun sequence (233012 bp)
Overview 1 RT 1: 126280-132674 bp Neighborhood of RT #1 [126280, 132700] TIGR02646 COG3950 RVT-Retrons CirA COG5515 Feature: gene Location: 126280-126921 bp Feature: domain Description: TIGR02646 Location: 126379-126748 bp Feature: domain Description: TIGR02 646 Location: 12 6379-12 6748 bp Feature: gene Location: 126926-128470 bp Feature: domain Description: COG3950 Location: 127100-128249 bp Feature: domain Description: COG3950 Location: 12 7100-12 82 49 bp Feature: gene Location: 128471-129346 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 128510-129110 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 8510-12 9110 bp Feature: gene Location: 130069-132258 bp Feature: domain Description: CirA Location: 130162-132256 bp Feature: domain Description: CirA Location: 130162 -132 2 56 bp Feature: gene Location: 132488-132700 bp Feature: domain Description: COG5515 Location: 132491-132674 bp Feature: domain Description: COG5515 Location: 132 491-132 674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, CirA (COG1629), COG5515 (Uncharacterized protein )