myRT

myRT report for GCA_001435395.1_ASM143539v1

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Seq: AYYX01000144.1 Lactobacillus vini DSM 20605 Scaffold144, whole genome shotgun sequence (1866 bp)
Overview 1 RT 1: 57-1672 bp Neighborhood of RT #1 [57, 1839] RVT-GII GIIM Feature: gene Location: 57-290 bp Feature: gene Location: 667-1839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775-1393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 775-1 393 bp Feature: domain Description: GIIM Note: maturase Location: 1447-1672 bp Feature: domain Description: GIIM Note: maturase Location: 1 447-1 672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AYYX01000140.1 Lactobacillus vini DSM 20605 Scaffold140, whole genome shotgun sequence (2223 bp)
Overview 1 RT 1: 112-2164 bp Neighborhood of RT #1 [112, 2164] RVT-GII RVT-GII PRK09183 Feature: gene Location: 112-879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 439-559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562 -811 bp Feature: gene Location: 870-1613 bp Feature: domain Description: PRK09183 Location: 879-1587 bp Feature: domain Description: PRK09183 Location: 879-1587 bp Feature: gene Location: 1610-2164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK09183 (transposase/IS protein; Provisional)

Seq: AYYX01000195.1 Lactobacillus vini DSM 20605 Scaffold195, whole genome shotgun sequence (808 bp)
Overview 1 RT 1: 33-597 bp Neighborhood of RT #1 [33, 770] RVT-GII GIIM Feature: gene Location: 33-770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42-324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42-3 24 bp Feature: domain Description: GIIM Note: maturase Location: 378-597 bp Feature: domain Description: GIIM Note: maturase Location: 3 78-597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AYYX01000060.1 Lactobacillus vini DSM 20605 Scaffold60, whole genome shotgun sequence (9523 bp)
Overview 1 RT 1: 5383-8827 bp Neighborhood of RT #1 [5383, 8835] LysR butanediol_DH_like RVT-GII Feature: gene Location: 5383-6222 bp Feature: domain Description: LysR Location: 5389-6202 bp Feature: domain Description: LysR Location: 5389-6202 bp Feature: gene Location: 7255-8331 bp Feature: domain Description: butanediol_DH_like Location: 7267-8323 bp Feature: domain Description: butanediol_DH_like Location: 7267-8323 bp Feature: gene Location: 8527-8835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8530-8827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8530-8827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), butanediol_DH_like (cd08233), RVT-GII