myRT

myRT report for GCA_001435845.1_ASM143584v1

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Seq: CM003596.1 Psychrobacter sp. P11G3 chromosome, whole genome shotgun sequence (3256231 bp)
Overview 1 RT 1: 1786313-1791825 bp 2 RT 2: 3131091-3138878 bp Neighborhood of RT #1 [1786313, 1791842] RVT-Retrons UvrA UvrA DUF819 Neighborhood of RT #2 [3131091, 3138886] HsdR RVT-UG2 PLDc_Nuc_like_unchar2 DnaJ HTH_XRE Feature: gene Location: 1786313-1787719 bp Ori: KRG37186.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1786784-1787480 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 786784-1 787480 bp Feature: gene Location: 1787813-1790380 bp Ori: KRG36873.1 Feature: domain Description: UvrA Location: 1787891-1788242 bp Feature: domain Description: UvrA Location: 1 787891 -1 788242 bp Feature: domain Description: UvrA Location: 1788266-1790375 bp Feature: domain Description: UvrA Location: 1 788266-1 790375 bp Feature: gene Location: 1790598-1791842 bp Ori: KRG36874.1 Feature: domain Description: DUF819 Location: 1790649-1791825 bp Feature: domain Description: DUF81 9 Location: 1 790649-1 791 825 bp Feature: gene Location: 3131091-3133526 bp Ori: KRG33282.1 Feature: domain Description: HsdR Location: 3131109-3133500 bp Feature: domain Description: HsdR Location: 31 31 1 09-31 33500 bp Feature: gene Location: 3133794-3134231 bp Feature: gene Location: 3134660-3135991 bp Ori: KRG33284.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3134867-3135704 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 31 34867-31 35704 bp Feature: gene Location: 3136034-3137389 bp Ori: KRG33285.1 Feature: domain Description: PLDc_Nuc_like_unchar2 Location: 3136043-3136451 bp Feature: domain Description: PLDc_Nuc_like_unchar2 Location: 31 36043-31 36451 bp Feature: domain Description: DnaJ Location: 3136997-3137111 bp Feature: domain Description: DnaJ Location: 31 36997-31 371 1 1 bp Feature: gene Location: 3138677-3138886 bp Ori: KRG33286.1 Feature: domain Description: HTH_XRE Location: 3138710-3138878 bp Feature: domain Description: HTH_XRE Location: 31 3871 0-31 38878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, UvrA (COG0178), DUF819 (pfam05684), HsdR (COG4096), RVT-UG2, PLDc_Nuc_like_unchar2 (cd09174), DnaJ (smart00271), HTH_XRE (smart00530)