myRT

myRT report for GCA_001435915.1_ASM143591v1

Download annotations/find similar RTs

Seq: AZGL01000007.1 Lactobacillus vaginalis DSM 5837 = ATCC 49540 strain DSM 5837 Scaffold7, whole genome shotgun sequence (52370 bp)
Overview 1 RT 1: 47955-52183 bp Neighborhood of RT #1 [47955, 52347] ddl TPR TPR RVT-GII RVT-GII GIIM Feature: gene Location: 47955-49091 bp Feature: domain Description: ddl Location: 47964-49002 bp Feature: domain Description: ddl Location: 47964-49002 bp Feature: gene Location: 49414-50193 bp Feature: domain Description: TPR Location: 49585-49765 bp Feature: domain Description: TPR Location: 49585-49765 bp Feature: domain Description: TPR Location: 49810-50119 bp Feature: domain Description: TPR Location: 4981 0-501 1 9 bp Feature: gene Location: 50958-51632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51276-51618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 276-51 61 8 bp Feature: gene Location: 51610-52347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51631-51901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 631 -51 901 bp Feature: domain Description: GIIM Note: maturase Location: 51955-52183 bp Feature: domain Description: GIIM Note: maturase Location: 51 955-521 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ddl (PRK01966), TPR (smart00028), RVT-GII, GIIM (pfam08388)

Seq: AZGL01000122.1 Lactobacillus vaginalis DSM 5837 = ATCC 49540 strain DSM 5837 Scaffold122, whole genome shotgun sequence (1245 bp)
Overview 1 RT 1: 293-1019 bp Neighborhood of RT #1 [293, 1195] RVT-GII Feature: gene Location: 293-1195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401-1019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401-1019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII