myRT

myRT report for GCA_001439815.1_G8783

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Seq: JYLM01000004.1 Pseudomonas orientalis strain DSM 17489 4_524553_15.3692, whole genome shotgun sequence (524553 bp)
Overview 1 RT 1: 235936-241685 bp Neighborhood of RT #1 [235936, 241720] SIRT5_Af1_CobB RVT-Retrons DUF262 DUF1524 Feature: gene Location: 235936-236703 bp Ori: KRP65431.1 Feature: domain Description: SIRT5_Af1_CobB Location: 235978-236668 bp Feature: domain Description: SIRT5_Af1 _CobB Location: 235978-236668 bp Feature: gene Location: 237312-237566 bp Feature: gene Location: 237639-238754 bp Ori: KRP65433.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 237777-238344 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 237777-238344 bp Feature: gene Location: 239688-239948 bp Feature: gene Location: 240047-241720 bp Ori: KRP65435.1 Feature: domain Description: DUF262 Location: 240086-240737 bp Feature: domain Description: DUF262 Location: 240086-240737 bp Feature: domain Description: DUF1524 Location: 241295-241685 bp Feature: domain Description: DUF1 524 Location: 241 295-241 685 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIRT5_Af1_CobB (cd01412), RVT-Retrons, DUF262 (pfam03235), DUF1524 (pfam07510)

Seq: JYLM01000006.1 Pseudomonas orientalis strain DSM 17489 6_388303_15.3381, whole genome shotgun sequence (388303 bp)
Overview 1 RT 1: 329974-337523 bp Neighborhood of RT #1 [329974, 337555] HipB RVT-Retrons DEXQc_UvrD DEXQc_UvrD UvrD_C_2 Feature: gene Location: 329974-330258 bp Ori: KRP64697.1 Feature: domain Description: HipB Location: 329992-330202 bp Feature: domain Description: HipB Location: 32 9992 -3302 02 bp Feature: gene Location: 331235-333436 bp Feature: gene Location: 333473-334636 bp Ori: KRP64699.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 333728-334349 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33372 8-334349 bp Feature: gene Location: 334798-336057 bp Feature: gene Location: 336137-337555 bp Ori: KRP64701.1 Feature: domain Description: DEXQc_UvrD Location: 336182-336434 bp Feature: domain Description: DEXQc_UvrD Location: 336182 -336434 bp Feature: domain Description: DEXQc_UvrD Location: 336464-336647 bp Feature: domain Description: DEXQc_UvrD Location: 336464-336647 bp Feature: domain Description: UvrD_C_2 Location: 337421-337523 bp Feature: domain Description: UvrD_C_2 Location: 33742 1-33752 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), RVT-Retrons, DEXQc_UvrD (cd17932), UvrD_C_2 (pfam13538)