myRT

myRT report for GCA_001440415.1_ASM144041v1

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Seq: LLYA01000144.1 Bradyrhizobium retamae strain Ro19 contig_228, whole genome shotgun sequence (1092 bp)
Overview 1 RT 1: 1-937 bp Neighborhood of RT #1 [1, 1014] RVT-GII GIIM Feature: gene Location: 1-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-622 bp Feature: domain Description: GIIM Note: maturase Location: 703-937 bp Feature: domain Description: GIIM Note: maturase Location: 703-937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LLYA01000064.1 Bradyrhizobium retamae strain Ro19 contig_156, whole genome shotgun sequence (3360 bp)
Overview 1 RT 1: 53-3360 bp Neighborhood of RT #1 [53, 3360] RVT-GII GIIM Feature: gene Location: 53-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56-488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56-488 bp Feature: domain Description: GIIM Note: maturase Location: 560-758 bp Feature: domain Description: GIIM Note: maturase Location: 560-758 bp Feature: gene Location: 2820-3360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LLYA01000048.1 Bradyrhizobium retamae strain Ro19 contig_141, whole genome shotgun sequence (4159 bp)
Overview 1 RT 1: 1-4159 bp Neighborhood of RT #1 [1, 4159] PinE RVT-GII DUF87 Feature: gene Location: 1-417 bp Feature: domain Description: PinE Location: 49-340 bp Feature: domain Description: PinE Location: 49-3 40 bp Feature: gene Location: 711-1004 bp Feature: gene Location: 1082-1360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1085-1313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1085-13 13 bp Feature: gene Location: 2020-3294 bp Feature: domain Description: DUF87 Location: 2482-2989 bp Feature: domain Description: DUF87 Location: 2482-2989 bp Feature: gene Location: 3496-4159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PinE (COG1961), DUF87 (pfam01935)

Seq: LLYA01000046.1 Bradyrhizobium retamae strain Ro19 contig_14, whole genome shotgun sequence (177984 bp)
Overview 1 RT 1: 114688-118428 bp Neighborhood of RT #1 [114688, 118428] RVT-Retrons Trypsin_2 Peptidase_M78 Feature: gene Location: 114688-114873 bp Feature: gene Location: 115371-116969 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 115530-116130 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 115530-116130 bp Feature: domain Description: Trypsin_2 Location: 116487-116889 bp Feature: domain Description: Trypsin_2 Location: 1164 87-116889 bp Feature: gene Location: 117231-117995 bp Feature: domain Description: Peptidase_M78 Location: 117372-117687 bp Feature: domain Description: Peptidase_M78 Location: 117372-117687 bp Feature: gene Location: 118000-118428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365), Peptidase_M78 (pfam06114)

Seq: LLYA01000075.1 Bradyrhizobium retamae strain Ro19 contig_166, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 1128-2677 bp Neighborhood of RT #1 [1128, 2676] RVT-GII Feature: gene Location: 1128-1376 bp Feature: gene Location: 1621-1824 bp Feature: gene Location: 2158-2676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2449-2677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2449-2677 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII