myRT

myRT report for GCA_001441335.1_ASM144133v1

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Seq: JTFE01000061.1 Escherichia coli VL2874 contig61, whole genome shotgun sequence (17248 bp)
Overview 1 RT 1: 7198-15032 bp Neighborhood of RT #1 [7198, 15061] ESPR O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT O_hepto_targRPT autotrans_barl DDE_Tnp_IS66_C RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 7198-11121 bp Feature: domain Description: ESPR Location: 7201-7270 bp Feature: domain Description: ESPR Location: 7201 -7270 bp Feature: domain Description: O_hepto_targRPT Location: 7366-7477 bp Feature: domain Description: O_hepto_targRPT Location: 7366-7477 bp Feature: domain Description: O_hepto_targRPT Location: 7483-7591 bp Feature: domain Description: O_hepto_targRPT Location: 7483-7591 bp Feature: domain Description: O_hepto_targRPT Location: 7594-7702 bp Feature: domain Description: O_hepto_targRPT Location: 7594-7702 bp Feature: domain Description: O_hepto_targRPT Location: 7714-7816 bp Feature: domain Description: O_hepto_targRPT Location: 771 4-781 6 bp Feature: domain Description: O_hepto_targRPT Location: 7819-7927 bp Feature: domain Description: O_hepto_targRPT Location: 781 9-7927 bp Feature: domain Description: O_hepto_targRPT Location: 7933-8041 bp Feature: domain Description: O_hepto_targRPT Location: 7933-8041 bp Feature: domain Description: O_hepto_targRPT Location: 8047-8155 bp Feature: domain Description: O_hepto_targRPT Location: 8047-81 55 bp Feature: domain Description: O_hepto_targRPT Location: 8164-8269 bp Feature: domain Description: O_hepto_targRPT Location: 81 64-8269 bp Feature: domain Description: O_hepto_targRPT Location: 8272-8380 bp Feature: domain Description: O_hepto_targRPT Location: 8272-8380 bp Feature: domain Description: O_hepto_targRPT Location: 8383-8494 bp Feature: domain Description: O_hepto_targRPT Location: 8383-8494 bp Feature: domain Description: O_hepto_targRPT Location: 8497-8608 bp Feature: domain Description: O_hepto_targRPT Location: 8497-8608 bp Feature: domain Description: O_hepto_targRPT Location: 8611-8719 bp Feature: domain Description: O_hepto_targRPT Location: 861 1 -871 9 bp Feature: domain Description: O_hepto_targRPT Location: 8722-8827 bp Feature: domain Description: O_hepto_targRPT Location: 8722-8827 bp Feature: domain Description: O_hepto_targRPT Location: 8833-8941 bp Feature: domain Description: O_hepto_targRPT Location: 8833-8941 bp Feature: domain Description: O_hepto_targRPT Location: 8944-9055 bp Feature: domain Description: O_hepto_targRPT Location: 8944-9055 bp Feature: domain Description: O_hepto_targRPT Location: 9061-9166 bp Feature: domain Description: O_hepto_targRPT Location: 9061 -91 66 bp Feature: domain Description: O_hepto_targRPT Location: 9223-9331 bp Feature: domain Description: O_hepto_targRPT Location: 9223-9331 bp Feature: domain Description: autotrans_barl Location: 9796-11119 bp Feature: domain Description: autotrans_barl Location: 9796-1 1 1 1 9 bp Feature: gene Location: 11299-11445 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 11311-11422 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 1 31 1 -1 1 422 bp Feature: gene Location: 11561-12793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11762-12416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 762-1 241 6 bp Feature: domain Description: GIIM Note: maturase Location: 12494-12716 bp Feature: domain Description: GIIM Note: maturase Location: 1 2494-1 271 6 bp Feature: gene Location: 13255-14694 bp Feature: domain Description: LZ_Tnp_IS66 Location: 13393-13618 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 3393-1 361 8 bp Feature: domain Description: zf-IS66 Location: 13639-13771 bp Feature: domain Description: zf-IS66 Location: 1 3639-1 3771 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13816-14653 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 381 6-1 4653 bp Feature: gene Location: 14714-15061 bp Feature: domain Description: TnpB_IS66 Location: 14741-15032 bp Feature: domain Description: TnpB_IS66 Location: 1 4741 -1 5032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717), ESPR (pfam13018), O_hepto_targRPT (TIGR04415), autotrans_barl (TIGR01414)