myRT

myRT report for GCA_001445765.1_E_coli_k1_949

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Seq: JQFT01000168.1 Escherichia coli K1 strain 949 contig171, whole genome shotgun sequence (1137 bp)
Overview 1 RT 1: 2-641 bp Neighborhood of RT #1 [2, 886] RVT-GII GIIM Feature: gene Location: 2-886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-368 bp Feature: domain Description: GIIM Note: maturase Location: 443-641 bp Feature: domain Description: GIIM Note: maturase Location: 443-641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JQFT01001936.1 Escherichia coli K1 strain 949 contig1956, whole genome shotgun sequence (2537 bp)
Overview 1 RT 1: 1-2433 bp Neighborhood of RT #1 [1, 2438] RVT-GII RVT-GII GIIM Feature: gene Location: 1-141 bp Feature: gene Location: 631-864 bp Feature: gene Location: 1350-1889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1680-1758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1680-1758 bp Feature: gene Location: 1917-2438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1923-2205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192 3-2 2 05 bp Feature: domain Description: GIIM Note: maturase Location: 2253-2433 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 53-2 433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JQFT01000957.1 Escherichia coli K1 strain 949 contig965, whole genome shotgun sequence (2813 bp)
Overview 1 RT 1: 3-2812 bp Neighborhood of RT #1 [3, 2811] rve PHA02517 RVT-GII Feature: gene Location: 3-1016 bp Feature: domain Description: rve Location: 375-768 bp Feature: domain Description: rve Location: 3 75-768 bp Feature: gene Location: 1306-1518 bp Feature: domain Description: PHA02517 Location: 1309-1453 bp Feature: domain Description: PHA02517 Location: 13 09-1453 bp Feature: gene Location: 2110-2811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2383-2812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 83 -2812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII