myRT

myRT report for GCA_001447385.1_ASM144738v1

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Seq: LLWQ01000031.1 Paracoccus sp. MKU1 Contig031, whole genome shotgun sequence (21556 bp)
Overview 1 RT 1: 7910-15057 bp Neighborhood of RT #1 [7910, 15113] N6_N4_Mtase RVT-UG20 Cls TetR_C_7 Feature: gene Location: 7910-9679 bp Ori: KRW97689.1 Feature: domain Description: N6_N4_Mtase Location: 7991-8993 bp Feature: domain Description: N6_N4_Mtase Location: 7991 -8993 bp Feature: gene Location: 10539-11279 bp Feature: gene Location: 11435-12988 bp Ori: KRW97691.1 Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 11750-12239 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 1 1 750-1 2239 bp Feature: gene Location: 13317-14843 bp Ori: KRW97699.1 Feature: domain Description: Cls Location: 13443-14802 bp Feature: domain Description: Cls Location: 1 3443-1 4802 bp Feature: gene Location: 14931-15113 bp Ori: KRW97692.1 Feature: domain Description: TetR_C_7 Location: 14952-15057 bp Feature: domain Description: TetR_C_7 Location: 1 4952-1 5057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_N4_Mtase (pfam01555), RVT-UG20, Cls (COG1502), TetR_C_7 (pfam14246)

Seq: LLWQ01000151.1 Paracoccus sp. MKU1 Contig151, whole genome shotgun sequence (9171 bp)
Overview 1 RT 1: 1075-7578 bp Neighborhood of RT #1 [1075, 8258] PRK14975 RVT-UG9 Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 1075-2103 bp Feature: gene Location: 2522-4072 bp Ori: KRW96194.1 Feature: domain Description: PRK14975 Location: 2930-4016 bp Feature: domain Description: PRK14975 Location: 2 930-4016 bp Feature: gene Location: 4065-5765 bp Ori: KRW96195.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 4335-4971 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 4335-4971 bp Feature: gene Location: 6282-6470 bp Feature: gene Location: 6486-8258 bp Ori: KRW96196.1 Feature: domain Description: Resolvase Location: 6495-6918 bp Feature: domain Description: Resolvase Location: 6495-6918 bp Feature: domain Description: Recombinase Location: 7014-7344 bp Feature: domain Description: Recombinase Location: 7014-7344 bp Feature: domain Description: Zn_ribbon_recom Location: 7422-7578 bp Feature: domain Description: Zn_ribbon_recom Location: 742 2 -7578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: LLWQ01000138.1 Paracoccus sp. MKU1 Contig138, whole genome shotgun sequence (13901 bp)
Overview 1 RT 1: 4553-11215 bp Neighborhood of RT #1 [4553, 11247] COG3905 RVT-Retrons recF recF DEXQc_UvrD DEXQc_UvrD UvrD Feature: gene Location: 4553-4996 bp Ori: KRW96489.1 Feature: domain Description: COG3905 Location: 4583-4706 bp Feature: domain Description: COG3 905 Location: 4583 -4706 bp Feature: gene Location: 5272-6528 bp Feature: gene Location: 6969-7871 bp Ori: KRW96491.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6975-7566 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6975-7566 bp Feature: gene Location: 7964-9730 bp Ori: KRW96492.1 Feature: domain Description: recF Location: 8006-8225 bp Feature: domain Description: recF Location: 8006-8225 bp Feature: domain Description: recF Location: 8786-8993 bp Feature: domain Description: recF Location: 8786-8993 bp Feature: gene Location: 9730-11247 bp Ori: KRW96493.1 Feature: domain Description: DEXQc_UvrD Location: 9754-10021 bp Feature: domain Description: DEXQc_UvrD Location: 9754-10021 bp Feature: domain Description: DEXQc_UvrD Location: 10054-10279 bp Feature: domain Description: DEXQc_UvrD Location: 10054-10279 bp Feature: domain Description: UvrD Location: 11062-11215 bp Feature: domain Description: UvrD Location: 11062-11215 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3905 (Predicted transcriptional regulator ), RVT-Retrons, recF (PRK14079), DEXQc_UvrD (cd17932), UvrD (COG0210)