myRT

myRT report for GCA_001449175.1_WH-SGI-V-07074

Download annotations/find similar RTs

Seq: LLLA01000038.1 Pseudomonas aeruginosa strain WH-SGI-V-07074 WH-SGI-V-07074_contig43, whole genome shotgun sequence (7136 bp)
Overview 1 RT 1: 2-5573 bp Neighborhood of RT #1 [2, 5770] DUF772 RVT-GII GIIM CHD CHD Feature: gene Location: 2-443 bp Feature: domain Description: DUF772 Location: 83-278 bp Feature: domain Description: DUF772 Location: 83-278 bp Feature: gene Location: 963-2231 bp Ori: KSC55483.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1176-1833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 76-1 833 bp Feature: domain Description: GIIM Note: maturase Location: 1911-2133 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 1 -21 33 bp Feature: gene Location: 2381-2707 bp Feature: gene Location: 4226-5770 bp Ori: KSC55484.1 Feature: domain Description: CHD Location: 4442-4856 bp Feature: domain Description: CHD Location: 4442-4856 bp Feature: domain Description: CHD Location: 5084-5573 bp Feature: domain Description: CHD Location: 5084-5573 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: LLLA01000034.1 Pseudomonas aeruginosa strain WH-SGI-V-07074 WH-SGI-V-07074_contig4, whole genome shotgun sequence (409194 bp)
Overview 1 RT 1: 320749-328037 bp Neighborhood of RT #1 [320749, 328099] HxlR PRK06333 RVT-UG2 YHI9 STN TonB-siderophor Feature: gene Location: 320749-321255 bp Ori: KSC56032.1 Feature: domain Description: HxlR Location: 320773-321091 bp Feature: domain Description: HxlR Location: 32 0773-32 1091 bp Feature: gene Location: 321364-322632 bp Ori: KSC56033.1 Feature: domain Description: PRK06333 Location: 321370-322627 bp Feature: domain Description: PRK06333 Location: 32 1370-32 2 62 7 bp Feature: gene Location: 323188-324477 bp Ori: KSC56034.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 323380-324166 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 32 3380-32 4166 bp Feature: gene Location: 324661-325497 bp Ori: KSC56035.1 Feature: domain Description: YHI9 Location: 324673-325489 bp Feature: domain Description: YHI9 Location: 32 4673-32 5489 bp Feature: gene Location: 325658-328099 bp Ori: KSC56036.1 Feature: domain Description: STN Location: 325817-325970 bp Feature: domain Description: STN Location: 32 5817-32 5970 bp Feature: domain Description: TonB-siderophor Location: 326078-328037 bp Feature: domain Description: TonB-siderophor Location: 32 6078-32 8037 bp Sorry, your browser does not support inline SVG.
Associated domains: