myRT

myRT report for GCA_001449585.1_WH-SGI-V-07172

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Seq: LLMB01000024.1 Pseudomonas aeruginosa strain WH-SGI-V-07172 WH-SGI-V-07172_contig26, whole genome shotgun sequence (83251 bp)
Overview 1 RT 1: 724-11416 bp Neighborhood of RT #1 [724, 11418] INT_Rci_Hp1_C RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 724-1482 bp Feature: gene Location: 1559-2653 bp Feature: domain Description: INT_Rci_Hp1_C Location: 2069-2570 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 2069-2570 bp Feature: gene Location: 2955-4640 bp Feature: RT Description: RVT_N Location: 3012-3252 bp Feature: RT Description: RVT_N Location: 301 2-3252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3300-3936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3300-3936 bp Feature: domain Description: GIIM Note: maturase Location: 3990-4221 bp Feature: domain Description: GIIM Note: maturase Location: 3990-4221 bp Feature: domain Description: HNH Note: nucleases Location: 4473-4611 bp Feature: domain Description: HNH Note: nucleases Location: 4473-461 1 bp Feature: gene Location: 5721-9458 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 5829-6486 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 5829-6486 bp Feature: domain Description: PRK09776 Location: 6699-7170 bp Feature: domain Description: PRK09776 Location: 6699-71 70 bp Feature: domain Description: PAS Location: 7215-7752 bp Feature: domain Description: PAS Location: 721 5-7752 bp Feature: domain Description: PRK10060 Location: 7761-9408 bp Feature: domain Description: PRK1 0060 Location: 7761 -9408 bp Feature: gene Location: 9565-11418 bp Feature: domain Description: PRK05658 Location: 9577-11416 bp Feature: domain Description: PRK05658 Location: 9577-1 1 41 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase)