myRT

myRT report for GCA_001450745.1_WH-SGI-V-07236

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Seq: LLNH01000010.1 Pseudomonas aeruginosa strain WH-SGI-V-07236 WH-SGI-V-07236_contig18, whole genome shotgun sequence (90421 bp)
Overview 1 RT 1: 37935-45182 bp Neighborhood of RT #1 [37935, 45943] DUF4354 TIGR04141 RVT-UG7 y4iL_like Cytochrome_CBB3 Cytochrome_CBB3 Feature: gene Location: 37935-38315 bp Ori: KSF53014.1 Feature: domain Description: DUF4354 Location: 37938-38304 bp Feature: domain Description: DUF4354 Location: 37938-38304 bp Feature: gene Location: 38868-40463 bp Ori: KSF53015.1 Feature: domain Description: TIGR04141 Location: 38886-40281 bp Feature: domain Description: TIGR041 41 Location: 38886-40281 bp Feature: gene Location: 40980-42551 bp Ori: OPD82391.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 41355-41769 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 41 355-41 769 bp Feature: gene Location: 42730-43869 bp Ori: KSF53016.1 Feature: domain Description: y4iL_like Location: 42967-43852 bp Feature: domain Description: y4iL_like Location: 42967-43852 bp Feature: gene Location: 44048-45943 bp Ori: KSF53017.1 Feature: domain Description: Cytochrome_CBB3 Location: 44411-44489 bp Feature: domain Description: Cytochrome_CBB3 Location: 4441 1 -44489 bp Feature: domain Description: Cytochrome_CBB3 Location: 45116-45182 bp Feature: domain Description: Cytochrome_CBB3 Location: 451 1 6-451 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4354 (pfam14263), TIGR04141 (sporadically distributed protein, TIGR04141 family), RVT-UG7, y4iL_like (cd08152), Cytochrome_CBB3 (pfam13442)

Seq: LLNH01000012.1 Pseudomonas aeruginosa strain WH-SGI-V-07236 WH-SGI-V-07236_contig2, whole genome shotgun sequence (769626 bp)
Overview 1 RT 1: 531622-537320 bp Neighborhood of RT #1 [531622, 537328] COG4127 AlpA RVT-UG5 HTH_Tnp_1 PHA02517 Feature: gene Location: 531622-532614 bp Ori: KSF52655.1 Feature: domain Description: COG4127 Location: 531628-532603 bp Feature: domain Description: COG412 7 Location: 53162 8-532 603 bp Feature: gene Location: 532619-532831 bp Ori: OPD82370.1 Feature: domain Description: AlpA Location: 532622-532793 bp Feature: domain Description: AlpA Location: 532 62 2 -532 793 bp Feature: gene Location: 532984-536031 bp Ori: KSF52656.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 533482-533983 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 533482 -533983 bp Feature: gene Location: 536138-536864 bp Feature: domain Description: HTH_Tnp_1 Location: 536144-536348 bp Feature: domain Description: HTH_Tnp_1 Location: 536144-536348 bp Feature: gene Location: 536930-537328 bp Ori: OPD82371.1 Feature: domain Description: PHA02517 Location: 536936-537320 bp Feature: domain Description: PHA02 517 Location: 536936-53732 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), AlpA (COG3311), RVT-UG5, HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed)