myRT

myRT report for GCA_001452445.1_WH-SGI-V-07685

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Seq: LLSF01000075.1 Pseudomonas aeruginosa strain WH-SGI-V-07685 WH-SGI-V-07685_contig3, whole genome shotgun sequence (370917 bp)
Overview 1 RT 1: 290180-299325 bp Neighborhood of RT #1 [290180, 299327] HipA_C RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 290180-290257 bp Feature: gene Location: 290243-290560 bp Feature: domain Description: HipA_C Location: 290276-290444 bp Feature: domain Description: HipA_C Location: 290276-290444 bp Feature: gene Location: 290864-292549 bp Feature: RT Description: RVT_N Location: 290921-291161 bp Feature: RT Description: RVT_N Location: 290921 -291 1 61 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291209-291845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 209-291 845 bp Feature: domain Description: GIIM Note: maturase Location: 291899-292130 bp Feature: domain Description: GIIM Note: maturase Location: 291 899-2921 30 bp Feature: domain Description: HNH Note: nucleases Location: 292382-292520 bp Feature: domain Description: HNH Note: nucleases Location: 292382-292520 bp Feature: gene Location: 293630-297367 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 293738-294395 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 293738-294395 bp Feature: domain Description: PRK09776 Location: 294608-295079 bp Feature: domain Description: PRK09776 Location: 294608-295079 bp Feature: domain Description: PAS Location: 295124-295661 bp Feature: domain Description: PAS Location: 2951 24-295661 bp Feature: domain Description: PRK10060 Location: 295670-297317 bp Feature: domain Description: PRK1 0060 Location: 295670-29731 7 bp Feature: gene Location: 297474-299327 bp Feature: domain Description: PRK05658 Location: 297486-299325 bp Feature: domain Description: PRK05658 Location: 297486-299325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipA_C (pfam07804), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)