myRT

myRT report for GCA_001452745.1_WH-SGI-V-07707

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Seq: LLTB01000087.1 Pseudomonas aeruginosa strain WH-SGI-V-07707 WH-SGI-V-07707_contig9, whole genome shotgun sequence (272506 bp) Associated domains: clpP, tig (TIGR00115), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), OmpR (COG0745), PRK10604 (sensor protein RstB; Provisional)

Seq: LLTB01000015.1 Pseudomonas aeruginosa strain WH-SGI-V-07707 WH-SGI-V-07707_contig22, whole genome shotgun sequence (101181 bp) Associated domains: DUF262 (pfam03235), COG3472 (Uncharacterized protein ), HATPase_c_3 (pfam13589), RVT-Retrons, DUF4354 (pfam14263), CoxL (COG1529)

Seq: LLTB01000002.1 Pseudomonas aeruginosa strain WH-SGI-V-07707 WH-SGI-V-07707_contig10, whole genome shotgun sequence (256690 bp) Associated domains: RVT-GII, GIIM (pfam08388), DUF3085 (pfam11284)

Seq: LLTB01000007.1 Pseudomonas aeruginosa strain WH-SGI-V-07707 WH-SGI-V-07707_contig15, whole genome shotgun sequence (177126 bp) Associated domains: DUF3800 (pfam12686), RVT-UG1, HTH_ARSR (smart00418), AlpA (COG3311)

Seq: LLTB01000034.1 Pseudomonas aeruginosa strain WH-SGI-V-07707 WH-SGI-V-07707_contig4, whole genome shotgun sequence (485408 bp) Associated domains: COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional)
PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), Tra5 (COG2801)