myRT

myRT report for GCA_001453235.1_WH-SGI-V-07503

Download annotations/find similar RTs

Seq: LLQJ01000062.1 Pseudomonas aeruginosa strain WH-SGI-V-07503 WH-SGI-V-07503_contig7, whole genome shotgun sequence (380603 bp)
Overview 1 RT 1: 73600-83564 bp Neighborhood of RT #1 [73600, 83617] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH RMtype1_S_EcoKI-TRD1-CR1_like Feature: gene Location: 73600-75453 bp Feature: domain Description: PRK05658 Location: 73612-75451 bp Feature: domain Description: PRK05658 Location: 7361 2-75451 bp Feature: gene Location: 75560-79297 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 75668-76325 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 75668-76325 bp Feature: domain Description: PRK09776 Location: 76538-77009 bp Feature: domain Description: PRK09776 Location: 76538-77009 bp Feature: domain Description: PAS Location: 77081-77591 bp Feature: domain Description: PAS Location: 77081 -77591 bp Feature: domain Description: PRK10060 Location: 77600-79247 bp Feature: domain Description: PRK1 0060 Location: 77600-79247 bp Feature: gene Location: 80378-82063 bp Feature: RT Description: RVT_N Location: 80435-80675 bp Feature: RT Description: RVT_N Location: 80435-80675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80723-81359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80723-81 359 bp Feature: domain Description: GIIM Note: maturase Location: 81413-81644 bp Feature: domain Description: GIIM Note: maturase Location: 81 41 3-81 644 bp Feature: domain Description: HNH Note: nucleases Location: 81896-82034 bp Feature: domain Description: HNH Note: nucleases Location: 81 896-82034 bp Feature: gene Location: 82418-82828 bp Feature: gene Location: 83036-83617 bp Feature: domain Description: RMtype1_S_EcoKI-TRD1-CR1_like Location: 83045-83564 bp Feature: domain Description: RMtype1 _S_EcoKI-TRD1 -CR1 _like Location: 83045-83564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), RMtype1_S_EcoKI-TRD1-CR1_like (cd17252)