myRT

myRT report for GCA_001453315.1_WH-SGI-V-07623

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Seq: LLQU01000001.1 Pseudomonas aeruginosa strain WH-SGI-V-07623 WH-SGI-V-07623_contig1, whole genome shotgun sequence (824292 bp)
Overview 1 RT 1: 454804-460355 bp 2 RT 2: 643170-649568 bp Neighborhood of RT #1 [454804, 460555] COG4916 PinE RVT-G2L4 PRK09362 YycJ-like_MBL-fold Neighborhood of RT #2 [643170, 649568] AcrR RVT-Retrons int Feature: gene Location: 454804-455715 bp Ori: KSL02576.1 Feature: domain Description: COG4916 Location: 455152-455689 bp Feature: domain Description: COG491 6 Location: 4551 52-455689 bp Feature: gene Location: 455999-456580 bp Ori: KSL02577.1 Feature: domain Description: PinE Location: 456002-456533 bp Feature: domain Description: PinE Location: 456002-456533 bp Feature: gene Location: 456746-457993 bp Ori: OPE06843.1 Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 456959-457553 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 456959-457553 bp Feature: gene Location: 459058-459768 bp Ori: KSL02578.1 Feature: domain Description: PRK09362 Location: 459061-459757 bp Feature: domain Description: PRK09362 Location: 459061 -459757 bp Feature: gene Location: 459797-460555 bp Ori: KSL02579.1 Feature: domain Description: YycJ-like_MBL-fold Location: 459812-460355 bp Feature: domain Description: YycJ-like_MBL-fold Location: 45981 2-460355 bp Feature: gene Location: 643170-643853 bp Ori: KSL02751.1 Feature: domain Description: AcrR Location: 643287-643755 bp Feature: domain Description: AcrR Location: 643287-643755 bp Feature: gene Location: 643941-644819 bp Feature: gene Location: 645522-647282 bp Ori: KSL02753.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 645651-646278 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 645651 -646278 bp Feature: gene Location: 647275-648276 bp Feature: domain Description: int Location: 647278-648253 bp Feature: domain Description: int Location: 647278-648253 bp Feature: gene Location: 648276-649568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4916 (Uncharacterized protein ), PinE (COG1961), RVT-G2L4, PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), YycJ-like_MBL-fold (cd07733), AcrR (COG1309), RVT-Retrons, int (PHA02601)