myRT

myRT report for GCA_001453495.1_WH-SGI-V-07648

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Seq: LLRT01000130.1 Pseudomonas aeruginosa strain WH-SGI-V-07648 WH-SGI-V-07648_contig5, whole genome shotgun sequence (372127 bp)
Overview 1 RT 1: 71705-80852 bp Neighborhood of RT #1 [71705, 80852] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH HipA_So_like Feature: gene Location: 71705-73558 bp Feature: domain Description: PRK05658 Location: 71717-73556 bp Feature: domain Description: PRK05658 Location: 71 71 7-73556 bp Feature: gene Location: 73665-77402 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73773-74430 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73773-74430 bp Feature: domain Description: PRK09776 Location: 74643-75114 bp Feature: domain Description: PRK09776 Location: 74643-751 1 4 bp Feature: domain Description: PAS Location: 75159-75696 bp Feature: domain Description: PAS Location: 751 59-75696 bp Feature: domain Description: PRK10060 Location: 75705-77352 bp Feature: domain Description: PRK1 0060 Location: 75705-77352 bp Feature: gene Location: 78483-80168 bp Feature: RT Description: RVT_N Location: 78540-78780 bp Feature: RT Description: RVT_N Location: 78540-78780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78828-79464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78828-79464 bp Feature: domain Description: GIIM Note: maturase Location: 79518-79749 bp Feature: domain Description: GIIM Note: maturase Location: 7951 8-79749 bp Feature: domain Description: HNH Note: nucleases Location: 80001-80139 bp Feature: domain Description: HNH Note: nucleases Location: 80001 -801 39 bp Feature: gene Location: 80472-80789 bp Feature: domain Description: HipA_So_like Location: 80511-80751 bp Feature: domain Description: HipA_So_like Location: 8051 1 -80751 bp Feature: gene Location: 80775-80852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), HipA_So_like (cd17809)