myRT

myRT report for GCA_001453585.1_WH-SGI-V-07682

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Seq: LLSC01000022.1 Pseudomonas aeruginosa strain WH-SGI-V-07682 WH-SGI-V-07682_contig23, whole genome shotgun sequence (96281 bp) Associated domains: CoxL (COG1529), DUF4354 (pfam14263), RVT-Retrons, HATPase_c_3 (pfam13589), DUF262 (pfam03235), COG3472 (Uncharacterized protein )

Seq: LLSC01000018.1 Pseudomonas aeruginosa strain WH-SGI-V-07682 WH-SGI-V-07682_contig2, whole genome shotgun sequence (552415 bp) Associated domains: ATPgrasp_ST (pfam14397), ATPgrasp_Ter (pfam15632), IS5 (COG3039), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)

Seq: LLSC01000057.1 Pseudomonas aeruginosa strain WH-SGI-V-07682 WH-SGI-V-07682_contig55, whole genome shotgun sequence (2426 bp) Associated domains: RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: LLSC01000073.1 Pseudomonas aeruginosa strain WH-SGI-V-07682 WH-SGI-V-07682_contig7, whole genome shotgun sequence (322659 bp) Associated domains: RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: LLSC01000040.1 Pseudomonas aeruginosa strain WH-SGI-V-07682 WH-SGI-V-07682_contig4, whole genome shotgun sequence (414344 bp) Associated domains: COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional)
PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein )

Seq: LLSC01000012.1 Pseudomonas aeruginosa strain WH-SGI-V-07682 WH-SGI-V-07682_contig14, whole genome shotgun sequence (192805 bp) Associated domains: SdhE (COG2938), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), YgfZ (COG0354), HDOD (pfam08668)