myRT

myRT report for GCA_001457415.1_Gorillibacterium_timonense

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Seq: LN881720.1 Gorillibacterium sp. SN4 genome assembly Gorillibacterium timonense, scaffold scaffold00003, whole genome shotgun sequence (350021 bp)
Overview 1 RT 1: 305092-309619 bp Neighborhood of RT #1 [305092, 309942] HTH_32 rve Mu-transpos_C RVT-GII GIIM Hydrolase_2 Feature: gene Location: 305092-306444 bp Feature: domain Description: HTH_32 Location: 305236-305458 bp Feature: domain Description: HTH_32 Location: 305236-305458 bp Feature: domain Description: rve Location: 305545-305893 bp Feature: domain Description: rve Location: 305545-305893 bp Feature: domain Description: Mu-transpos_C Location: 306094-306223 bp Feature: domain Description: Mu-transpos_C Location: 306094-306223 bp Feature: gene Location: 306482-307288 bp Feature: gene Location: 307451-308935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307943-308576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307943-308576 bp Feature: domain Description: GIIM Note: maturase Location: 308672-308876 bp Feature: domain Description: GIIM Note: maturase Location: 308672-308876 bp Feature: gene Location: 309034-309249 bp Feature: gene Location: 309277-309942 bp Feature: domain Description: Hydrolase_2 Location: 309436-309619 bp Feature: domain Description: Hydrolase_2 Location: 309436-30961 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), rve (pfam00665), Mu-transpos_C (pfam09299), RVT-GII, GIIM (pfam08388), Hydrolase_2 (pfam07486)

Seq: LN881723.1 Gorillibacterium sp. SN4 genome assembly Gorillibacterium timonense, scaffold scaffold00006, whole genome shotgun sequence (1130530 bp)
Overview 1 RT 1: 267403-272778 bp 2 RT 2: 503105-510401 bp Neighborhood of RT #1 [267403, 272927] EnvC RVT-GII GIIM PBP2_UgpB Neighborhood of RT #2 [503105, 510412] COG3547 COG3547 RVT-UG8 Cauli_VI GIYc PRK13480 Feature: gene Location: 267403-268377 bp Feature: gene Location: 268579-269652 bp Feature: domain Description: EnvC Location: 268690-269194 bp Feature: domain Description: EnvC Location: 2 68690-2 69194 bp Feature: gene Location: 269747-271147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270059-270686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 70059-2 70686 bp Feature: domain Description: GIIM Note: maturase Location: 270743-270971 bp Feature: domain Description: GIIM Note: maturase Location: 2 70743-2 70971 bp Feature: gene Location: 271188-271433 bp Feature: gene Location: 271617-272927 bp Feature: domain Description: PBP2_UgpB Location: 271815-272778 bp Feature: domain Description: PBP2 _UgpB Location: 2 71815-2 72 778 bp Feature: gene Location: 503105-503335 bp Feature: gene Location: 503371-504666 bp Feature: domain Description: COG3547 Location: 503437-504112 bp Feature: domain Description: COG3547 Location: 503437-504112 bp Feature: domain Description: COG3547 Location: 504145-504583 bp Feature: domain Description: COG3547 Location: 504145-504583 bp Feature: gene Location: 504810-506735 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 505296-505743 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 5052 96-505743 bp Feature: gene Location: 508681-509250 bp Feature: domain Description: Cauli_VI Location: 508693-508825 bp Feature: domain Description: Cauli_VI Location: 508693-50882 5 bp Feature: domain Description: GIYc Location: 508936-509176 bp Feature: domain Description: GIYc Location: 508936-509176 bp Feature: gene Location: 509453-510412 bp Feature: domain Description: PRK13480 Location: 509468-510401 bp Feature: domain Description: PRK13480 Location: 509468-510401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EnvC (COG4942), RVT-GII, GIIM (pfam08388), PBP2_UgpB (cd14748), COG3547 (Transposase ), RVT-UG8, Cauli_VI (pfam01693), GIYc (smart00465), PRK13480 (3'-5' exoribonuclease YhaM; Provisional)