myRT

myRT report for GCA_001458735.1__COMA1_

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Seq: CZQA01000012.1 Candidatus Nitrospira nitrosa, isolate COMA1 genome assembly, contig: COMA1_Contig_6, whole genome shotgun sequence (199989 bp)
Overview 1 RT 1: 108796-114348 bp Neighborhood of RT #1 [108796, 114353] COG3547 RVT-UG12 RlmK Feature: gene Location: 108796-109215 bp Feature: gene Location: 109823-110839 bp Ori: CUS38838.1 Feature: domain Description: COG3547 Location: 109835-110795 bp Feature: domain Description: COG3547 Location: 1 09835-1 1 0795 bp Feature: gene Location: 111282-112829 bp Ori: CUS38839.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 111621-112062 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 1 1 621 -1 1 2062 bp Feature: gene Location: 113005-113190 bp Feature: gene Location: 113166-114353 bp Ori: CUS38843.1 Gene: rlmI Feature: domain Description: RlmK Location: 113214-114348 bp Feature: domain Description: RlmK Location: 1 1 321 4-1 1 4348 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-UG12, RlmK (COG1092)

Seq: CZQA01000008.1 Candidatus Nitrospira nitrosa, isolate COMA1 genome assembly, contig: COMA1_Contig_2, whole genome shotgun sequence (727365 bp)
Overview 1 RT 1: 294793-298277 bp Neighborhood of RT #1 [294793, 298277] Imm_superinfect RVT-UG16 Feature: gene Location: 294793-294996 bp Ori: CUS35475.1 Feature: domain Description: Imm_superinfect Location: 294844-294967 bp Feature: domain Description: Imm_superinfect Location: 2 94844-2 94967 bp Feature: gene Location: 294924-295067 bp Feature: gene Location: 295438-296940 bp Ori: CUS35479.1 Gene: pyrE Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 295792-296194 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 2 95792 -2 96194 bp Feature: gene Location: 297565-297744 bp Feature: gene Location: 297789-298277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Imm_superinfect (pfam14373), RVT-UG16