myRT

myRT report for GCA_001461765.1_ASM146176v1

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Seq: AUSY01000048.1 Sinorhizobium sp. GW3 contig43, whole genome shotgun sequence (96433 bp)
Overview 1 RT 1: 16067-19991 bp Neighborhood of RT #1 [16067, 19999] DUF2384 RP-C_C RVT-GII DAP_dppA_3 BioF Feature: gene Location: 16067-16462 bp Ori: KSV67365.1 Feature: domain Description: DUF2384 Location: 16310-16445 bp Feature: domain Description: DUF2384 Location: 1 631 0-1 6445 bp Feature: gene Location: 16591-16815 bp Ori: KSV67366.1 Feature: domain Description: RP-C_C Location: 16594-16792 bp Feature: domain Description: RP-C_C Location: 1 6594-1 6792 bp Feature: gene Location: 16900-17586 bp Ori: KSV67367.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17011-17533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 701 1 -1 7533 bp Feature: gene Location: 17775-18575 bp Ori: KSV67368.1 Feature: domain Description: DAP_dppA_3 Location: 17778-18564 bp Feature: domain Description: DAP_dppA_3 Location: 1 7778-1 8564 bp Feature: gene Location: 18947-19999 bp Ori: KSV67369.1 Feature: domain Description: BioF Location: 18965-19991 bp Feature: domain Description: BioF Location: 1 8965-1 9991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2384 (pfam09722), RP-C_C (pfam11800), RVT-GII, DAP_dppA_3 (cd08770), BioF (COG0156)

Seq: AUSY01000017.1 Sinorhizobium sp. GW3 contig15, whole genome shotgun sequence (270452 bp)
Overview 1 RT 1: 108044-114534 bp Neighborhood of RT #1 [108044, 114539] RVT-UG7 COG4328 NucS COG3586 Feature: gene Location: 108044-108442 bp Feature: gene Location: 109814-110743 bp Feature: gene Location: 110814-112370 bp Ori: KSV76428.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 111249-111639 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1112 49-111639 bp Feature: gene Location: 112736-113572 bp Ori: KSV76429.1 Feature: domain Description: COG4328 Location: 112775-113561 bp Feature: domain Description: COG432 8 Location: 112 775-113561 bp Feature: gene Location: 113559-114539 bp Ori: KSV76430.1 Feature: domain Description: NucS Location: 113649-113877 bp Feature: domain Description: NucS Location: 113649-113877 bp Feature: domain Description: COG3586 Location: 114231-114534 bp Feature: domain Description: COG3586 Location: 1142 31-114534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, COG4328 (Predicted nuclease (RNAse H fold) ), NucS (pfam01939), COG3586 (Predicted transport protein )