myRT

myRT report for GCA_001462255.1_ASM146225v1

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Seq: LIUJ01000139.1 Fibrobacteria bacterium GUT77 contig_25739, whole genome shotgun sequence (8090 bp)
Overview 1 RT 1: 238-4263 bp Neighborhood of RT #1 [238, 4718] Fib_succ_major Avd_like RVT-DGRs SUA5 Feature: gene Location: 238-996 bp Feature: domain Description: Fib_succ_major Location: 580-991 bp Feature: domain Description: Fib_succ_major Location: 580-991 bp Feature: gene Location: 1136-1942 bp Feature: domain Description: Avd_like Location: 1550-1847 bp Feature: domain Description: Avd_like Location: 1 550-1 847 bp Feature: gene Location: 1939-3039 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2200-2902 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2200-2902 bp Feature: gene Location: 3245-3637 bp Feature: gene Location: 3645-4718 bp Feature: domain Description: SUA5 Location: 3666-4263 bp Feature: domain Description: SUA5 Location: 3666-4263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fib_succ_major (TIGR02145), Avd_like (cd16376), RVT-DGRs, SUA5 (pfam03481)

Seq: LIUJ01000176.1 Fibrobacteria bacterium GUT77 contig_35766, whole genome shotgun sequence (3279 bp)
Overview 1 RT 1: 654-3277 bp Neighborhood of RT #1 [654, 3277] HTH_3 HRDC RVT-DGRs Feature: gene Location: 654-1061 bp Feature: domain Description: HTH_3 Location: 774-927 bp Feature: domain Description: HTH_3 Location: 774-92 7 bp Feature: gene Location: 1125-1838 bp Feature: domain Description: HRDC Location: 1533-1725 bp Feature: domain Description: HRDC Location: 1533-172 5 bp Feature: gene Location: 1835-2851 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2045-2633 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 045-2 633 bp Feature: gene Location: 3125-3277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_3 (pfam01381), HRDC (smart00341), RVT-DGRs

Seq: LIUJ01000257.1 Fibrobacteria bacterium GUT77 contig_68002, whole genome shotgun sequence (3771 bp)
Overview 1 RT 1: 1-3068 bp Neighborhood of RT #1 [1, 3073] RVT-DGRs HRDC LpoB LpoB YfmG Feature: gene Location: 1-489 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 211-487 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 211-487 bp Feature: gene Location: 464-628 bp Feature: domain Description: HRDC Location: 467-557 bp Feature: domain Description: HRDC Location: 467-557 bp Feature: gene Location: 1346-3073 bp Feature: domain Description: LpoB Location: 1682-1799 bp Feature: domain Description: LpoB Location: 1682-1799 bp Feature: domain Description: LpoB Location: 2021-2222 bp Feature: domain Description: LpoB Location: 2021-2222 bp Feature: domain Description: YfmG Location: 2366-3068 bp Feature: domain Description: YfmG Location: 23 66-3 068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, HRDC (smart00341), LpoB (pfam13036), YfmG (COG1262)