myRT

myRT report for GCA_001462705.1_ASM146270v1

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Seq: LNGX01000156.1 Klebsiella pneumoniae strain K57-33 contig91, whole genome shotgun sequence (143466 bp)
Overview 1 RT 1: 47084-52502 bp Neighborhood of RT #1 [47084, 52519] RVT-UG4 FimD FimC Feature: gene Location: 47084-49114 bp Ori: KSW78896.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47492-47936 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47492-47936 bp Feature: gene Location: 49114-51708 bp Ori: KSW78810.1 Feature: domain Description: FimD Location: 49156-51697 bp Feature: domain Description: FimD Location: 491 56-51 697 bp Feature: gene Location: 51755-52519 bp Ori: KSW78811.1 Feature: domain Description: FimC Location: 51800-52502 bp Feature: domain Description: FimC Location: 51 800-52502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: LNGX01000061.1 Klebsiella pneumoniae strain K57-33 contig153, whole genome shotgun sequence (12787 bp)
Overview 1 RT 1: 1-4725 bp Neighborhood of RT #1 [1, 4730] StbA RVT-GII PRK10276 umuC Feature: gene Location: 1-895 bp Ori: KSW90534.1 Feature: domain Description: StbA Location: 4-883 bp Feature: domain Description: StbA Location: 4-883 bp Feature: gene Location: 1144-2628 bp Ori: KSW90535.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1546-2236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1546-2 2 36 bp Feature: gene Location: 3034-3459 bp Ori: KSW90536.1 Feature: domain Description: PRK10276 Location: 3037-3445 bp Feature: domain Description: PRK102 76 Location: 3037-3445 bp Feature: gene Location: 3459-4730 bp Ori: KSW90537.1 Feature: domain Description: umuC Location: 3462-4725 bp Feature: domain Description: umuC Location: 3462 -472 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)