myRT

myRT report for GCA_001462715.1_ASM146271v1

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Seq: LNGY01000027.1 Escherichia coli strain K71-77 contig23, whole genome shotgun sequence (28852 bp)
Overview 1 RT 1: 16058-19100 bp Neighborhood of RT #1 [16058, 19114] PRK10597 SLATT_5 RVT-UG17 endolysin_R21_like Phage_holin_2_1 Feature: gene Location: 16058-16306 bp Ori: KSW91352.1 Feature: domain Description: PRK10597 Location: 16061-16301 bp Feature: domain Description: PRK1 0597 Location: 1 6061 -1 6301 bp Feature: gene Location: 16529-17080 bp Ori: KSW91353.1 Feature: domain Description: SLATT_5 Location: 16535-17051 bp Feature: domain Description: SLATT_5 Location: 1 6535-1 7051 bp Feature: gene Location: 17058-18428 bp Ori: KSW91354.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 17286-17892 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 7286-1 7892 bp Feature: gene Location: 18555-18899 bp Feature: domain Description: endolysin_R21_like Location: 18651-18888 bp Feature: domain Description: endolysin_R21 _like Location: 1 8651 -1 8888 bp Feature: gene Location: 18899-19114 bp Ori: KSW91355.1 Feature: domain Description: Phage_holin_2_1 Location: 18914-19100 bp Feature: domain Description: Phage_holin_2_1 Location: 1 891 4-1 91 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), SLATT_5 (pfam18160), RVT-UG17, endolysin_R21_like, Phage_holin_2_1 (pfam04971)

Seq: LNGY01000016.1 Escherichia coli strain K71-77 contig13, whole genome shotgun sequence (97344 bp)
Overview 1 RT 1: 49371-53254 bp Neighborhood of RT #1 [49371, 53259] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49371-49829 bp Ori: KSW92713.1 Feature: domain Description: dut Location: 49377-49824 bp Feature: domain Description: dut Location: 49377-4982 4 bp Feature: gene Location: 49936-50532 bp Ori: KSW92714.1 Gene: slmA Feature: domain Description: slmA Location: 49942-50518 bp Feature: domain Description: slmA Location: 49942 -50518 bp Feature: gene Location: 50578-51537 bp Ori: KSW92715.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50713-51262 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50713-512 62 bp Feature: gene Location: 51835-52476 bp Ori: KSW92716.1 Gene: pyrE Feature: domain Description: pyrE Location: 51838-52471 bp Feature: domain Description: pyrE Location: 51838-52 471 bp Feature: gene Location: 52543-53259 bp Ori: KSW92717.1 Gene: rph Feature: domain Description: rph Location: 52546-53254 bp Feature: domain Description: rph Location: 52 546-532 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)