myRT

myRT report for GCA_001462885.1_ASM146288v1

Download annotations/find similar RTs

Seq: LNHI01000061.1 Klebsiella pneumoniae strain 50531633 contig5, whole genome shotgun sequence (26134 bp)
Overview 1 RT 1: 10903-15897 bp Neighborhood of RT #1 [10903, 15899] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 10903-12174 bp Ori: KSX40504.1 Feature: domain Description: umuC Location: 10906-12169 bp Feature: domain Description: umuC Location: 1 0906-1 21 69 bp Feature: gene Location: 12174-12599 bp Ori: KSX40505.1 Feature: domain Description: PRK10276 Location: 12177-12585 bp Feature: domain Description: PRK1 0276 Location: 1 21 77-1 2585 bp Feature: gene Location: 13005-14489 bp Ori: KSX40506.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13407-14097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3407-1 4097 bp Feature: gene Location: 14723-14953 bp Feature: gene Location: 15474-15899 bp Ori: KSX40508.1 Feature: domain Description: Antirestrict Location: 15609-15897 bp Feature: domain Description: Antirestrict Location: 1 5609-1 5897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: LNHI01000111.1 Klebsiella pneumoniae strain 50531633 contig95, whole genome shotgun sequence (102373 bp)
Overview 1 RT 1: 58320-65236 bp Neighborhood of RT #1 [58320, 65241] PRK11462 SLATT_5 RVT-UG17 PRK09678 PRK00872 Feature: gene Location: 58320-59714 bp Ori: KSX31795.1 Feature: domain Description: PRK11462 Location: 58323-59709 bp Feature: domain Description: PRK11462 Location: 5832 3-59709 bp Feature: gene Location: 61290-61931 bp Ori: KSX31839.1 Feature: domain Description: SLATT_5 Location: 61293-61896 bp Feature: domain Description: SLATT_5 Location: 612 93-61896 bp Feature: gene Location: 62126-63535 bp Ori: KSX31796.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 62363-62975 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 62 363-62 975 bp Feature: gene Location: 64440-64643 bp Ori: KSX31840.1 Feature: domain Description: PRK09678 Location: 64485-64617 bp Feature: domain Description: PRK09678 Location: 64485-64617 bp Feature: gene Location: 64774-65241 bp Ori: KSX31797.1 Feature: domain Description: PRK00872 Location: 64780-65236 bp Feature: domain Description: PRK00872 Location: 64780-652 36 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11462 (putative transporter; Provisional), SLATT_5 (pfam18160), RVT-UG17, PRK09678 (DNA-binding transcriptional regulator; Provisional), PRK00872 (hypothetical protein; Provisional)