myRT

myRT report for GCA_001462905.1_ASM146290v1

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Seq: LNHJ01000010.1 Klebsiella pneumoniae strain 50572569 contig107, whole genome shotgun sequence (10925 bp)
Overview 1 RT 1: 4853-9869 bp Neighborhood of RT #1 [4853, 9871] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 4853-6124 bp Ori: KSX63328.1 Feature: domain Description: umuC Location: 4856-6119 bp Feature: domain Description: umuC Location: 4856-61 1 9 bp Feature: gene Location: 6124-6549 bp Ori: KSX63329.1 Feature: domain Description: PRK10276 Location: 6127-6535 bp Feature: domain Description: PRK1 0276 Location: 61 27-6535 bp Feature: gene Location: 6954-8462 bp Ori: KSX63330.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7356-8070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7356-8070 bp Feature: gene Location: 8696-8926 bp Feature: gene Location: 9446-9871 bp Ori: KSX63331.1 Feature: domain Description: Antirestrict Location: 9581-9869 bp Feature: domain Description: Antirestrict Location: 9581 -9869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: LNHJ01000002.1 Klebsiella pneumoniae strain 50572569 contig10, whole genome shotgun sequence (228820 bp)
Overview 1 RT 1: 221253-225510 bp Neighborhood of RT #1 [221253, 226736] FimC FimD RVT-UG4 Feature: gene Location: 221253-222017 bp Ori: KSX64262.1 Feature: domain Description: FimC Location: 221298-222000 bp Feature: domain Description: FimC Location: 2 2 12 98-2 2 2 000 bp Feature: gene Location: 222064-224658 bp Ori: KSX64263.1 Feature: domain Description: FimD Location: 222106-224647 bp Feature: domain Description: FimD Location: 2 2 2 106-2 2 4647 bp Feature: gene Location: 224655-226736 bp Ori: KSX64264.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 225066-225510 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 2 5066-2 2 5510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4