myRT

myRT report for GCA_001463615.1_ASM146361v1

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Seq: LNIG01000115.1 Klebsiella pneumoniae strain 50752501 contig40, whole genome shotgun sequence (24889 bp)
Overview 1 RT 1: 13112-17090 bp Neighborhood of RT #1 [13112, 17992] RVT-Retrons Phage_GPA Feature: gene Location: 13112-13306 bp Feature: gene Location: 13305-13742 bp Feature: gene Location: 13867-14817 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14047-14590 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4047-1 4590 bp Feature: gene Location: 15140-15433 bp Feature: gene Location: 15704-17992 bp Feature: domain Description: Phage_GPA Location: 16103-17090 bp Feature: domain Description: Phage_GPA Location: 1 61 03-1 7090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Phage_GPA (pfam05840)

Seq: LNIG01000109.1 Klebsiella pneumoniae strain 50752501 contig35, whole genome shotgun sequence (104065 bp)
Overview 1 RT 1: 98393-103883 bp Neighborhood of RT #1 [98393, 104065] DUF4917 AAA_15 RVT-Retrons Feature: gene Location: 98393-99412 bp Feature: domain Description: DUF4917 Location: 98453-99377 bp Feature: domain Description: DUF4917 Location: 98453-99377 bp Feature: gene Location: 100811-103057 bp Feature: domain Description: AAA_15 Location: 100814-101822 bp Feature: domain Description: AAA_15 Location: 100814-10182 2 bp Feature: gene Location: 103172-104065 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103355-103883 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103355-103883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, DUF4917 (pfam16263)

Seq: LNIG01000070.1 Klebsiella pneumoniae strain 50752501 contig163, whole genome shotgun sequence (9285 bp)
Overview 1 RT 1: 500-5512 bp Neighborhood of RT #1 [500, 5512] HHA RVT-GII INT_Cre_C Feature: gene Location: 500-1567 bp Feature: gene Location: 1653-1907 bp Feature: domain Description: HHA Location: 1704-1887 bp Feature: domain Description: HHA Location: 1704-1887 bp Feature: gene Location: 2423-3907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2825-3515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2825-3 515 bp Feature: gene Location: 3993-5129 bp Feature: domain Description: INT_Cre_C Location: 4416-5070 bp Feature: domain Description: INT_Cre_C Location: 4416-5070 bp Feature: gene Location: 5195-5512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)