myRT

myRT report for GCA_001464165.1_bacterium_Ga0077546

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Seq: LNEX01000158.1 Bacterium Ga0077546 isolate Ga0077546 Ga0077546_1134.1, whole genome shotgun sequence (6294 bp)
Overview 1 RT 1: 1650-4950 bp Neighborhood of RT #1 [1650, 6293] DUF900 RVT-CRISPR-like RVT-CRISPR-like Feature: gene Location: 1650-2018 bp Feature: gene Location: 2068-3603 bp Feature: domain Description: DUF900 Location: 2527-3049 bp Feature: domain Description: DUF900 Location: 2527-3049 bp Feature: gene Location: 3780-6293 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3990-4137 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3990-41 37 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4605-4950 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4605-4950 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF900 (pfam05990), RVT-CRISPR

Seq: LNEX01000228.1 Bacterium Ga0077546 isolate Ga0077546 Ga0077546_1188.1, whole genome shotgun sequence (5976 bp)
Overview 1 RT 1: 1-2828 bp Neighborhood of RT #1 [1, 2828] SAF_CpaB_FlgA_like RVT-GII RVT-GII Feature: gene Location: 1-351 bp Feature: domain Description: SAF_CpaB_FlgA_like Location: 43-223 bp Feature: domain Description: SAF_CpaB_FlgA_like Location: 43-2 2 3 bp Feature: gene Location: 557-823 bp Feature: gene Location: 969-1517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1365-1515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1365-1515 bp Feature: gene Location: 1617-1916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1620-1905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 0-1905 bp Feature: gene Location: 1981-2223 bp Feature: gene Location: 2532-2828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SAF_CpaB_FlgA_like (cd11614), RVT-GII

Seq: LNEX01000579.1 Bacterium Ga0077546 isolate Ga0077546 Ga0077546_1470.1, whole genome shotgun sequence (3266 bp)
Overview 1 RT 1: 179-3263 bp Neighborhood of RT #1 [179, 3263] RVT-Retrons Feature: gene Location: 179-337 bp Feature: gene Location: 480-1418 bp Feature: gene Location: 1473-2396 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1593-2145 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1593 -2145 bp Feature: gene Location: 2640-3263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons