myRT

myRT report for GCA_001465015.1_Deltaproteobacteria_bacterium_Ga0077539

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Seq: LNEO01000109.1 Deltaproteobacteria bacterium Ga0077539 Ga0077539_1094.2, whole genome shotgun sequence (34010 bp)
Overview 1 RT 1: 1817-11106 bp Neighborhood of RT #1 [1817, 11106] VWA_CoxE Kelch Kelch Kelch RVT-Retrons Feature: gene Location: 1817-3655 bp Feature: domain Description: VWA_CoxE Location: 2927-3581 bp Feature: domain Description: VWA_CoxE Location: 2927-3581 bp Feature: gene Location: 3874-5001 bp Feature: domain Description: Kelch Location: 4030-4312 bp Feature: domain Description: Kelch Location: 4030-431 2 bp Feature: domain Description: Kelch Location: 4378-4639 bp Feature: domain Description: Kelch Location: 4378-4639 bp Feature: domain Description: Kelch Location: 4705-4969 bp Feature: domain Description: Kelch Location: 4705-4969 bp Feature: gene Location: 5105-7024 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6176-6794 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 76-6794 bp Feature: gene Location: 7634-9331 bp Feature: gene Location: 9394-11106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VWA_CoxE (pfam05762), Kelch (smart00612), RVT-Retrons

Seq: LNEO01000197.1 Deltaproteobacteria bacterium Ga0077539 Ga0077539_1169.2, whole genome shotgun sequence (95936 bp)
Overview 1 RT 1: 27643-34029 bp Neighborhood of RT #1 [27643, 34886] TufB STKc_PknB_like RVT-Retrons RT_Bac_retron_II rpt_mate_G_obs Feature: gene Location: 27643-28920 bp Feature: domain Description: TufB Location: 27673-28822 bp Feature: domain Description: TufB Location: 2 7673-2 882 2 bp Feature: gene Location: 29013-32336 bp Feature: domain Description: STKc_PknB_like Location: 31473-32313 bp Feature: domain Description: STKc_PknB_like Location: 31473-32 313 bp Feature: gene Location: 32456-33583 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33065-33551 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33065-33551 bp Feature: gene Location: 33094-33903 bp Feature: domain Description: RT_Bac_retron_II Location: 33583-33721 bp Feature: domain Description: RT_Bac_retron_II Location: 33583-3372 1 bp Feature: gene Location: 33900-34886 bp Feature: domain Description: rpt_mate_G_obs Location: 33924-34029 bp Feature: domain Description: rpt_mate_G_obs Location: 3392 4-3402 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TufB (COG0050), STKc_PknB_like (cd14014), RVT-Retrons, RT_Bac_retron_II (cd03487), rpt_mate_G_obs (TIGR02996)

Seq: LNEO01000259.1 Deltaproteobacteria bacterium Ga0077539 Ga0077539_1222.2, whole genome shotgun sequence (52634 bp)
Overview 1 RT 1: 8878-21164 bp Neighborhood of RT #1 [8878, 21250] retinol-DH_like_SDR_c_like RVT-Retrons WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 8878-9768 bp Feature: domain Description: retinol-DH_like_SDR_c_like Location: 8902-9721 bp Feature: domain Description: retinol-DH_like_SDR_c_like Location: 8902-9721 bp Feature: gene Location: 10038-11357 bp Feature: gene Location: 11499-12872 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12048-12648 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12048-12648 bp Feature: gene Location: 12891-14735 bp Feature: gene Location: 14732-21250 bp Feature: domain Description: WD40 Location: 14825-15503 bp Feature: domain Description: WD40 Location: 14825-15503 bp Feature: domain Description: HEAT_2 Location: 15749-15977 bp Feature: domain Description: HEAT_2 Location: 15749-15977 bp Feature: domain Description: HEAT_2 Location: 16022-16253 bp Feature: domain Description: HEAT_2 Location: 16022-16253 bp Feature: domain Description: HEAT_2 Location: 16595-16844 bp Feature: domain Description: HEAT_2 Location: 16595-16844 bp Feature: domain Description: HEAT_2 Location: 16991-17240 bp Feature: domain Description: HEAT_2 Location: 16991-17240 bp Feature: domain Description: HEAT_2 Location: 17339-17435 bp Feature: domain Description: HEAT_2 Location: 173 3 9-1743 5 bp Feature: domain Description: HEAT_2 Location: 17456-17735 bp Feature: domain Description: HEAT_2 Location: 17456-1773 5 bp Feature: domain Description: HEAT_2 Location: 17771-17912 bp Feature: domain Description: HEAT_2 Location: 17771-17912 bp Feature: domain Description: HEAT_2 Location: 18557-18806 bp Feature: domain Description: HEAT_2 Location: 18557-18806 bp Feature: domain Description: HEAT_2 Location: 18941-19193 bp Feature: domain Description: HEAT_2 Location: 18941-19193 bp Feature: domain Description: HEAT_2 Location: 19751-20015 bp Feature: domain Description: HEAT_2 Location: 19751-20015 bp Feature: domain Description: HEAT_2 Location: 20081-20270 bp Feature: domain Description: HEAT_2 Location: 20081-20270 bp Feature: domain Description: HEAT_2 Location: 20993-21164 bp Feature: domain Description: HEAT_2 Location: 20993 -21164 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retinol-DH_like_SDR_c_like (cd05327), RVT-Retrons, WD40 (smart00320), HEAT_2 (pfam13646)