myRT

myRT report for GCA_001466815.1_ASM146681v1

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Seq: ATLX01000010.1 Escherichia coli NCCP 15656 contig10, whole genome shotgun sequence (782887 bp)
Overview 1 RT 1: 780450-782886 bp Neighborhood of RT #1 [780450, 782886] DDE_Tnp_1_assoc group_II_RT_mat RVT-GII group_II_RT_mat Feature: gene Location: 780450-780581 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 780471-780576 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 780471 -780576 bp Feature: gene Location: 780788-781204 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 780794-781088 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 780794-781 088 bp Feature: gene Location: 781373-781771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 781382-781748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 781 382-781 748 bp Feature: gene Location: 781804-782307 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 782113-782254 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7821 1 3-782254 bp Feature: gene Location: 782647-782886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), group_II_RT_mat (TIGR04416), RVT-GII

Seq: ATLX01000013.1 Escherichia coli NCCP 15656 contig13, whole genome shotgun sequence (813173 bp)
Overview 1 RT 1: 145196-149918 bp Neighborhood of RT #1 [145196, 150010] PRK09692 RVT-Retrons Psu PRK09678 PRK09678 Feature: gene Location: 145196-146362 bp Feature: domain Description: PRK09692 Location: 145205-146357 bp Feature: domain Description: PRK09692 Location: 1452 05-146357 bp Feature: gene Location: 146550-147227 bp Feature: gene Location: 147229-148728 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147940-148495 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147940-148495 bp Feature: gene Location: 148918-149490 bp Feature: domain Description: Psu Location: 148936-149473 bp Feature: domain Description: Psu Location: 148936-149473 bp Feature: gene Location: 149564-150010 bp Feature: domain Description: PRK09678 Location: 149573-149645 bp Feature: domain Description: PRK09678 Location: 149573-149645 bp Feature: domain Description: PRK09678 Location: 149768-149918 bp Feature: domain Description: PRK09678 Location: 149768-149918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)