myRT

myRT report for GCA_001467005.1_ASM146700v1

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Seq: ATLW01000002.1 Escherichia coli NCCP 15655 contig2, whole genome shotgun sequence (1892096 bp)
Overview 1 RT 1: 522791-525854 bp Neighborhood of RT #1 [522791, 525854] DDE_Tnp_1_assoc group_II_RT_mat RVT-GII group_II_RT_mat Feature: gene Location: 522791-522922 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 522812-522917 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 52281 2-52291 7 bp Feature: gene Location: 523129-523545 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 523135-523429 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5231 35-523429 bp Feature: gene Location: 523714-524112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 523723-524089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 523723-524089 bp Feature: gene Location: 524145-524648 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 524454-524595 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 524454-524595 bp Feature: gene Location: 524988-525854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), group_II_RT_mat (TIGR04416), RVT-GII

Seq: ATLW01000004.1 Escherichia coli NCCP 15655 contig4, whole genome shotgun sequence (2252129 bp)
Overview 1 RT 1: 145156-149878 bp Neighborhood of RT #1 [145156, 149970] PRK09692 RVT-Retrons Psu PRK09678 PRK09678 Feature: gene Location: 145156-146322 bp Feature: domain Description: PRK09692 Location: 145165-146317 bp Feature: domain Description: PRK09692 Location: 145165-146317 bp Feature: gene Location: 146510-147187 bp Feature: gene Location: 147189-148688 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147900-148455 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 147900-148455 bp Feature: gene Location: 148878-149450 bp Feature: domain Description: Psu Location: 148896-149433 bp Feature: domain Description: Psu Location: 148896-149433 bp Feature: gene Location: 149524-149970 bp Feature: domain Description: PRK09678 Location: 149533-149605 bp Feature: domain Description: PRK09678 Location: 149533-149605 bp Feature: domain Description: PRK09678 Location: 149728-149878 bp Feature: domain Description: PRK09678 Location: 14972 8-149878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)