myRT

myRT report for GCA_001467505.1_ASM146750v1

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Seq: LNXT01000012.1 Legionella birminghamensis strain CDC#1407-AL-14 Lbir_ctg012, whole genome shotgun sequence (96592 bp)
Overview 1 RT 1: 44897-49259 bp Neighborhood of RT #1 [44897, 49273] Homeodomain RVT-GII GIIM PHA02517 RelE Feature: gene Location: 44897-45922 bp Feature: gene Location: 46290-47480 bp Feature: domain Description: Homeodomain Location: 46341-46494 bp Feature: domain Description: Homeodomain Location: 46341 -46494 bp Feature: gene Location: 47761-48405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47770-47881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47770-47881 bp Feature: domain Description: GIIM Note: maturase Location: 47932-48166 bp Feature: domain Description: GIIM Note: maturase Location: 47932-481 66 bp Feature: gene Location: 48544-48777 bp Feature: domain Description: PHA02517 Location: 48547-48748 bp Feature: domain Description: PHA0251 7 Location: 48547-48748 bp Feature: gene Location: 48884-49273 bp Feature: domain Description: RelE Location: 48887-49259 bp Feature: domain Description: RelE Location: 48887-49259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Homeodomain, RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), RelE (pfam06296)

Seq: LNXT01000042.1 Legionella birminghamensis strain CDC#1407-AL-14 Lbir_ctg043, whole genome shotgun sequence (36619 bp)
Overview 1 RT 1: 23437-28546 bp Neighborhood of RT #1 [23437, 28776] EndA RVT_N RVT-GII GIIM HTH_32 Feature: gene Location: 23437-24396 bp Feature: gene Location: 24393-24707 bp Feature: domain Description: EndA Location: 24405-24699 bp Feature: domain Description: EndA Location: 2 4405-2 4699 bp Feature: gene Location: 24967-26454 bp Feature: RT Description: RVT_N Location: 25024-25267 bp Feature: RT Description: RVT_N Location: 2 502 4-2 52 67 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25312-25942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5312 -2 5942 bp Feature: domain Description: GIIM Note: maturase Location: 25993-26227 bp Feature: domain Description: GIIM Note: maturase Location: 2 5993-2 62 2 7 bp Feature: gene Location: 27436-27696 bp Feature: gene Location: 28135-28776 bp Feature: domain Description: HTH_32 Location: 28309-28546 bp Feature: domain Description: HTH_32 Location: 2 8309-2 8546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EndA (COG2356), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565)

Seq: LNXT01000023.1 Legionella birminghamensis strain CDC#1407-AL-14 Lbir_ctg024, whole genome shotgun sequence (16971 bp)
Overview 1 RT 1: 657-5338 bp Neighborhood of RT #1 [657, 5361] PHA02517 RVT_N RVT-GII GIIM DDE_Tnp_Tn3 YjiC Feature: gene Location: 657-902 bp Feature: domain Description: PHA02517 Location: 687-891 bp Feature: domain Description: PHA02517 Location: 687-891 bp Feature: gene Location: 1493-2941 bp Feature: RT Description: RVT_N Location: 1541-1784 bp Feature: RT Description: RVT_N Location: 1541-1784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1829-2453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1829-2453 bp Feature: domain Description: GIIM Note: maturase Location: 2504-2738 bp Feature: domain Description: GIIM Note: maturase Location: 2504-273 8 bp Feature: gene Location: 3524-4552 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 3530-4472 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 3 53 0-4472 bp Feature: gene Location: 4588-5361 bp Feature: domain Description: YjiC Location: 4600-5338 bp Feature: domain Description: YjiC Location: 4600-53 3 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_Tn3 (pfam01526), YjiC (COG1819), PHA02517 (putative transposase OrfB; Reviewed)