myRT

myRT report for GCA_001467765.1_ASM146776v1

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Seq: LNYJ01000011.1 Legionella jordanis strain BL-540 Ljor_ctg011, whole genome shotgun sequence (2700909 bp)
Overview 1 RT 1: 906052-909774 bp 2 RT 2: 1006823-1012400 bp 3 RT 3: 2632774-2638502 bp Neighborhood of RT #1 [906052, 909794] Tra5 HTH_Tnp_1 RVT-GII Methyltransf_31 PinE Neighborhood of RT #2 [1006823, 1012423] TIG Avd_like RVT-DGRs DUF772 HTH_ARSR Neighborhood of RT #3 [2632774, 2638502] RVT-UG18 Feature: gene Location: 906052-906843 bp Ori: KTD16838.1 Feature: domain Description: Tra5 Location: 906088-906820 bp Feature: domain Description: Tra5 Location: 906088-906820 bp Feature: gene Location: 906876-907139 bp Ori: KTD16839.1 Feature: domain Description: HTH_Tnp_1 Location: 906882-907089 bp Feature: domain Description: HTH_Tnp_1 Location: 906882-907089 bp Feature: gene Location: 907207-907650 bp Ori: KTD16840.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907384-907645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907384-907645 bp Feature: gene Location: 908650-909540 bp Ori: KTD16841.1 Feature: domain Description: Methyltransf_31 Location: 908755-909145 bp Feature: domain Description: Methyltransf_31 Location: 908755-9091 45 bp Feature: gene Location: 909537-909794 bp Ori: KTD16842.1 Feature: domain Description: PinE Location: 909540-909774 bp Feature: domain Description: PinE Location: 909540-909774 bp Feature: gene Location: 1006823-1008376 bp Ori: KTD16943.1 Feature: domain Description: TIG Location: 1007564-1007789 bp Feature: domain Description: TIG Location: 1 007564-1 007789 bp Feature: gene Location: 1008454-1008795 bp Ori: KTD16944.1 Feature: domain Description: Avd_like Location: 1008481-1008787 bp Feature: domain Description: Avd_like Location: 1 008481 -1 008787 bp Feature: gene Location: 1009145-1010344 bp Ori: KTD16945.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1009364-1010060 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 009364-1 01 0060 bp Feature: gene Location: 1010363-1011823 bp Ori: KTD16946.1 Feature: domain Description: DUF772 Location: 1010546-1010738 bp Feature: domain Description: DUF772 Location: 1 01 0546-1 01 0738 bp Feature: gene Location: 1012106-1012423 bp Ori: KTD16947.1 Gene: bigR Feature: domain Description: HTH_ARSR Location: 1012178-1012400 bp Feature: domain Description: HTH_ARSR Location: 1 01 21 78-1 01 2400 bp Feature: gene Location: 2632774-2632995 bp Feature: gene Location: 2633187-2634107 bp Feature: gene Location: 2634299-2635300 bp Ori: KTD18427.1 Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2634521-2635103 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 2634521 -26351 03 bp Feature: gene Location: 2635442-2636725 bp Feature: gene Location: 2636850-2638502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), HTH_Tnp_1 (pfam01527), RVT-GII, Methyltransf_31 (pfam13847), PinE (COG1961), TIG, Avd_like (cd16376), RVT-DGRs, DUF772 (pfam05598), HTH_ARSR (smart00418)
RVT-UG18