myRT

myRT report for GCA_001467785.1_ASM146778v1

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Seq: LNYH01000106.1 Legionella israelensis strain Bercovier 4 Lisr_ctg106, whole genome shotgun sequence (20767 bp)
Overview 1 RT 1: 4507-8175 bp Neighborhood of RT #1 [4507, 8180] HTH_21 P-type_ATPase_cation RVT-GII GIIM YhhI DDE_Tnp_1_assoc YhhI Feature: gene Location: 4507-5040 bp Feature: domain Description: HTH_21 Location: 4852-4984 bp Feature: domain Description: HTH_21 Location: 4852-4984 bp Feature: gene Location: 5107-5265 bp Feature: domain Description: P-type_ATPase_cation Location: 5110-5257 bp Feature: domain Description: P-type_ATPase_cation Location: 51 1 0-5257 bp Feature: gene Location: 5428-6711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5713-6400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571 3-6400 bp Feature: domain Description: GIIM Note: maturase Location: 6487-6688 bp Feature: domain Description: GIIM Note: maturase Location: 6487-6688 bp Feature: gene Location: 7318-7602 bp Feature: domain Description: YhhI Location: 7453-7591 bp Feature: domain Description: YhhI Location: 7453-7591 bp Feature: gene Location: 7686-8180 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 7710-7968 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 771 0-7968 bp Feature: domain Description: YhhI Location: 8109-8175 bp Feature: domain Description: YhhI Location: 81 09-81 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), P-type_ATPase_cation (cd07543), RVT-GII, GIIM (pfam08388), YhhI (COG5433), DDE_Tnp_1_assoc (pfam13808)

Seq: LNYH01000048.1 Legionella israelensis strain Bercovier 4 Lisr_ctg048, whole genome shotgun sequence (14199 bp)
Overview 1 RT 1: 1614-6571 bp Neighborhood of RT #1 [1614, 6571] ssb RVT_N RVT-GII GIIM ArdA Feature: gene Location: 1614-1814 bp Feature: gene Location: 1903-2325 bp Feature: domain Description: ssb Location: 1912-2287 bp Feature: domain Description: ssb Location: 1912 -2 2 87 bp Feature: gene Location: 3080-4291 bp Feature: RT Description: RVT_N Location: 3134-3377 bp Feature: RT Description: RVT_N Location: 3134-3377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3422-4079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342 2 -4079 bp Feature: domain Description: GIIM Note: maturase Location: 4145-4280 bp Feature: domain Description: GIIM Note: maturase Location: 4145-42 80 bp Feature: gene Location: 4673-5377 bp Feature: domain Description: ArdA Location: 4748-5153 bp Feature: domain Description: ArdA Location: 4748-5153 bp Feature: gene Location: 5243-6571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ssb (TIGR00621), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), ArdA (pfam07275)

Seq: LNYH01000149.1 Legionella israelensis strain Bercovier 4 Lisr_ctg149, whole genome shotgun sequence (269193 bp)
Overview 1 RT 1: 162547-167577 bp Neighborhood of RT #1 [162547, 167577] COG3666 DDE_Tnp_1_6 RVT-GII GIIM xerC Feature: gene Location: 162547-162801 bp Feature: gene Location: 162798-164114 bp Feature: domain Description: COG3666 Location: 162843-163266 bp Feature: domain Description: COG3 666 Location: 162843 -163 266 bp Feature: domain Description: DDE_Tnp_1_6 Location: 163749-164079 bp Feature: domain Description: DDE_Tnp_1_6 Location: 163 749-164079 bp Feature: gene Location: 164822-166063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165020-165677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165020-165677 bp Feature: domain Description: GIIM Note: maturase Location: 165761-165971 bp Feature: domain Description: GIIM Note: maturase Location: 165761-165971 bp Feature: gene Location: 166162-167118 bp Feature: domain Description: xerC Location: 166192-166993 bp Feature: domain Description: xerC Location: 166192-166993 bp Feature: gene Location: 167140-167577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388), xerC (PRK01287)