myRT

myRT report for GCA_001467975.1_ASM146797v1

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Seq: LNYS01000023.1 Legionella quinlivanii strain CDC#1442-AUS-E Lqui_ctg023, whole genome shotgun sequence (12495 bp)
Overview 1 RT 1: 925-6621 bp Neighborhood of RT #1 [925, 6677] DUF2188 RVT-UG2 PRK09413 HTH_21 HTH_21 PRK09409 PRK09409 RVT-UG2 DUF927 HTH_17 Feature: gene Location: 925-1773 bp Feature: gene Location: 1811-2047 bp Ori: KTD46502.1 Feature: domain Description: DUF2188 Location: 1835-2012 bp Feature: domain Description: DUF21 88 Location: 1 835-201 2 bp Feature: gene Location: 2391-3110 bp Ori: KTD46503.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2580-3105 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2580-31 05 bp Feature: gene Location: 3173-3643 bp Ori: KTD46504.1 Feature: domain Description: PRK09413 Location: 3218-3545 bp Feature: domain Description: PRK0941 3 Location: 321 8-3545 bp Feature: gene Location: 3791-4012 bp Ori: KTD46505.1 Feature: domain Description: HTH_21 Location: 3824-3917 bp Feature: domain Description: HTH_21 Location: 3824-391 7 bp Feature: domain Description: HTH_21 Location: 3938-3971 bp Feature: domain Description: HTH_21 Location: 3938-3971 bp Feature: gene Location: 4433-5245 bp Ori: KTD46506.1 Feature: domain Description: PRK09409 Location: 4445-4553 bp Feature: domain Description: PRK09409 Location: 4445-4553 bp Feature: domain Description: PRK09409 Location: 4565-5228 bp Feature: domain Description: PRK09409 Location: 4565-5228 bp Feature: gene Location: 5352-5642 bp Ori: KTD46507.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5370-5613 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5370-561 3 bp Feature: gene Location: 5683-6336 bp Ori: KTD46508.1 Feature: domain Description: DUF927 Location: 5764-6229 bp Feature: domain Description: DUF927 Location: 5764-6229 bp Feature: gene Location: 6402-6677 bp Ori: KTD46509.1 Feature: domain Description: HTH_17 Location: 6492-6621 bp Feature: domain Description: HTH_1 7 Location: 6492-6621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2188 (pfam09954), RVT-UG2, PRK09413 (IS2 repressor TnpA; Reviewed), HTH_21 (pfam13276), PRK09409 (IS2 transposase TnpB; Reviewed), DUF927 (pfam06048), HTH_17 (pfam12728)