myRT

myRT report for GCA_001468105.1_ASM146810v1

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Seq: LNYV01000036.1 Legionella sainthelensi strain Mt.St.Helens-4 Lsai_ctg036, whole genome shotgun sequence (572040 bp)
Overview 1 RT 1: 416993-422261 bp Neighborhood of RT #1 [416993, 423094] Trypsin_2 RVT-AbiP2 DUF5338 DUF927 Feature: gene Location: 416993-417757 bp Feature: gene Location: 417821-418693 bp Ori: KTD55164.1 Feature: domain Description: Trypsin_2 Location: 417914-418433 bp Feature: domain Description: Trypsin_2 Location: 41 791 4-41 8433 bp Feature: gene Location: 418793-420328 bp Ori: KTD55165.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 419243-419717 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 41 9243-41 971 7 bp Feature: gene Location: 420628-420984 bp Ori: KTD55166.1 Feature: domain Description: DUF5338 Location: 420637-420835 bp Feature: domain Description: DUF5338 Location: 420637-420835 bp Feature: gene Location: 421328-423094 bp Ori: KTD55167.1 Feature: domain Description: DUF927 Location: 421424-422261 bp Feature: domain Description: DUF927 Location: 421 424-422261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Trypsin_2 (pfam13365), RVT-AbiP2, DUF5338 (pfam17273), DUF927 (pfam06048)

Seq: LNYV01000028.1 Legionella sainthelensi strain Mt.St.Helens-4 Lsai_ctg028, whole genome shotgun sequence (169962 bp)
Overview 1 RT 1: 162441-169382 bp Neighborhood of RT #1 [162441, 169426] CAP_ED CPBP RVT-UNC GGDEF EAL Feature: gene Location: 162441-164507 bp Feature: gene Location: 164520-165632 bp Ori: KTD57203.1 Feature: domain Description: CAP_ED Location: 164559-164859 bp Feature: domain Description: CAP_ED Location: 164559-164859 bp Feature: domain Description: CPBP Location: 165336-165585 bp Feature: domain Description: CPBP Location: 165336-165585 bp Feature: gene Location: 165607-167016 bp Ori: KTD57204.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 165868-166504 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 165868-166504 bp Feature: gene Location: 167345-167755 bp Feature: gene Location: 167780-169426 bp Ori: KTD57206.1 Feature: domain Description: GGDEF Location: 168125-168605 bp Feature: domain Description: GGDEF Location: 16812 5-168605 bp Feature: domain Description: EAL Location: 168680-169382 bp Feature: domain Description: EAL Location: 168680-169382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CAP_ED (cl00047), CPBP, RVT-UG27/RVT-DGRs/RVT-CRISPR(RVT-UNC), GGDEF (TIGR00254), EAL (smart00052)

Seq: LNYV01000037.1 Legionella sainthelensi strain Mt.St.Helens-4 Lsai_ctg037, whole genome shotgun sequence (729808 bp)
Overview 1 RT 1: 34700-40302 bp Neighborhood of RT #1 [34700, 40302] RVT_N RVT-GII Feature: gene Location: 34700-36136 bp Feature: gene Location: 36363-36665 bp Feature: gene Location: 36782-37852 bp Ori: KTD54085.1 Feature: domain Description: RVT_N Location: 36839-37082 bp Feature: domain Description: RVT_N Location: 3 683 9-3 7082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37127-37733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 7127-3 773 3 bp Feature: gene Location: 38486-39871 bp Feature: gene Location: 40075-40302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII