myRT

myRT report for GCA_001469215.1_ASM146921v1

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Seq: LOFH01000006.1 Pseudoalteromonas sp. H105 H105DRAFT_scaffold00006.6, whole genome shotgun sequence (261466 bp)
Overview 1 RT 1: 181679-187185 bp Neighborhood of RT #1 [181679, 187185] bcp RVT-Retrons AAA_21 Feature: gene Location: 181679-181924 bp Feature: gene Location: 182565-183023 bp Ori: KTF14853.1 Feature: domain Description: bcp Location: 182571-183021 bp Feature: domain Description: bcp Location: 1 82571 -1 83021 bp Feature: gene Location: 183078-184259 bp Ori: KTF14925.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 183234-183864 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 83234-1 83864 bp Feature: gene Location: 184396-186636 bp Ori: KTF14854.1 Feature: domain Description: AAA_21 Location: 184471-185401 bp Feature: domain Description: AAA_21 Location: 1 84471 -1 85401 bp Feature: gene Location: 186715-187185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bcp (PRK09437), RVT-Retrons, AAA_21 (pfam13304)

Seq: LOFH01000001.1 Pseudoalteromonas sp. H105 H105DRAFT_scaffold00001.1, whole genome shotgun sequence (843547 bp)
Overview 1 RT 1: 388776-394109 bp Neighborhood of RT #1 [388776, 394267] PRK11788 PRK00230 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 388776-389912 bp Ori: KTF18150.1 Feature: domain Description: PRK11788 Location: 388779-389904 bp Feature: domain Description: PRK11788 Location: 388779-389904 bp Feature: gene Location: 389948-390658 bp Ori: KTF18151.1 Feature: domain Description: PRK00230 Location: 389966-390650 bp Feature: domain Description: PRK002 30 Location: 389966-390650 bp Feature: gene Location: 391003-391923 bp Ori: KTF18152.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 391105-391690 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 391105-391690 bp Feature: gene Location: 391920-393554 bp Ori: KTF18153.1 Feature: domain Description: COG3950 Location: 392109-393435 bp Feature: domain Description: COG3950 Location: 392 109-393435 bp Feature: gene Location: 393551-394267 bp Ori: KTF18154.1 Feature: domain Description: TIGR02646 Location: 393638-394109 bp Feature: domain Description: TIGR02 646 Location: 393638-394109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11788 (tetratricopeptide repeat protein; Provisional), PRK00230 (orotidine-5'-phosphate decarboxylase), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)