myRT

myRT report for GCA_001471225.1_SMART_1147.v1

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Seq: LPOA01000001.1 Enterobacter hormaechei subsp. xiangfangensis strain SMART_1147 contig1, whole genome shotgun sequence (125355 bp)
Overview 1 RT 1: 68745-73273 bp Neighborhood of RT #1 [68745, 73791] N6_Mtase RVT-GII GIIM HTH_43 SPO0J_N KorB Feature: gene Location: 68745-69122 bp Feature: gene Location: 69676-70305 bp Feature: domain Description: N6_Mtase Location: 69892-70177 bp Feature: domain Description: N6_Mtase Location: 69892-701 77 bp Feature: gene Location: 70379-71695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70631-71246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70631 -71 246 bp Feature: domain Description: GIIM Note: maturase Location: 71297-71522 bp Feature: domain Description: GIIM Note: maturase Location: 71 297-71 522 bp Feature: gene Location: 72289-72561 bp Feature: domain Description: HTH_43 Location: 72304-72532 bp Feature: domain Description: HTH_43 Location: 72304-72532 bp Feature: gene Location: 72610-73791 bp Feature: domain Description: SPO0J_N Location: 72688-72970 bp Feature: domain Description: SPO0J_N Location: 72688-72970 bp Feature: domain Description: KorB Location: 73015-73273 bp Feature: domain Description: KorB Location: 7301 5-73273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), RVT-GII, GIIM (pfam08388), HTH_43 (pfam09904), SPO0J_N (cd16393), KorB (pfam08535)

Seq: LPOA01000022.1 Enterobacter hormaechei subsp. xiangfangensis strain SMART_1147 contig29, whole genome shotgun sequence (260652 bp)
Overview 1 RT 1: 43174-47325 bp Neighborhood of RT #1 [43174, 47360] COG3547 IS5 RVT-GII InsE PHA02517 Feature: gene Location: 43174-44199 bp Feature: domain Description: COG3547 Location: 43189-44140 bp Feature: domain Description: COG3547 Location: 43189-44140 bp Feature: gene Location: 44393-44905 bp Feature: domain Description: IS5 Location: 44582-44906 bp Feature: domain Description: IS5 Location: 44582 -44906 bp Feature: gene Location: 45427-46137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45640-46138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45640-46138 bp Feature: gene Location: 46225-46530 bp Feature: domain Description: InsE Location: 46228-46495 bp Feature: domain Description: InsE Location: 462 2 8-46495 bp Feature: gene Location: 46527-47360 bp Feature: domain Description: PHA02517 Location: 46668-47325 bp Feature: domain Description: PHA02 517 Location: 46668-4732 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), IS5 (COG3039), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)