myRT

myRT report for GCA_001471395.2_ASM147139v2

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Seq: LOSJ02000002.1 Vibrio mimicus strain FDAARGOS_113 unitig_0_quiver_quiver_pilon, whole genome shotgun sequence (3051225 bp)
Overview 1 RT 1: 2232090-2240418 bp Neighborhood of RT #1 [2232090, 2240459] DUF4092 M60-like_N Peptidase_M60 RVT-GII GIIM PRK09692 DUF4096 DDE_Tnp_1 Feature: gene Location: 2232090-2236664 bp Feature: domain Description: DUF4092 Location: 2233266-2233785 bp Feature: domain Description: DUF4092 Location: 2233266-2233785 bp Feature: domain Description: M60-like_N Location: 2235330-2235594 bp Feature: domain Description: M60-like_N Location: 2235330-2235594 bp Feature: domain Description: Peptidase_M60 Location: 2235639-2236512 bp Feature: domain Description: Peptidase_M60 Location: 2235639-223651 2 bp Feature: gene Location: 2236770-2236958 bp Feature: gene Location: 2237246-2238556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2237462-2238074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2237462-2238074 bp Feature: domain Description: GIIM Note: maturase Location: 2238128-2238344 bp Feature: domain Description: GIIM Note: maturase Location: 22381 28-2238344 bp Feature: gene Location: 2239177-2239452 bp Feature: domain Description: PRK09692 Location: 2239180-2239450 bp Feature: domain Description: PRK09692 Location: 22391 80-2239450 bp Feature: gene Location: 2240052-2240459 bp Feature: domain Description: DUF4096 Location: 2240055-2240184 bp Feature: domain Description: DUF4096 Location: 2240055-22401 84 bp Feature: domain Description: DDE_Tnp_1 Location: 2240232-2240418 bp Feature: domain Description: DDE_Tnp_1 Location: 2240232-224041 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4092 (pfam13322), M60-like_N (pfam17291), Peptidase_M60 (pfam13402), RVT-GII, GIIM (pfam08388), PRK09692 (Integrase; provisional), DUF4096 (pfam13340), DDE_Tnp_1 (pfam01609)