myRT

myRT report for GCA_001471415.2_ASM147141v2

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Seq: LORY02000003.1 Vibrio vulnificus strain FDAARGOS_117 unitig_0_quiver_quiver_pilon, whole genome shotgun sequence (3257722 bp)
Overview 1 RT 1: 2677170-2685625 bp Neighborhood of RT #1 [2677170, 2685750] RMtype1_S_TRD-CR_like RMtype1_S_Eco933I-TRD2-CR2_like COG0610 RVT-UG2 Couple_hipA HipA_C HTH_XRE Feature: gene Location: 2677170-2678324 bp Ori: PNM96573.1 Feature: domain Description: RMtype1_S_TRD-CR_like Location: 2677191-2677659 bp Feature: domain Description: RMtype1 _S_TRD-CR_like Location: 26771 91 -2677659 bp Feature: domain Description: RMtype1_S_Eco933I-TRD2-CR2_like Location: 2677752-2678316 bp Feature: domain Description: RMtype1 _S_Eco933I-TRD2-CR2_like Location: 2677752-267831 6 bp Feature: gene Location: 2678340-2681402 bp Ori: PNM96574.1 Feature: domain Description: COG0610 Location: 2678349-2680506 bp Feature: domain Description: COG061 0 Location: 2678349-2680506 bp Feature: gene Location: 2681459-2683114 bp Ori: PNM96575.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2681834-2682719 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2681 834-268271 9 bp Feature: gene Location: 2684102-2685433 bp Ori: PNM96576.1 Feature: domain Description: Couple_hipA Location: 2684126-2684453 bp Feature: domain Description: Couple_hipA Location: 26841 26-2684453 bp Feature: domain Description: HipA_C Location: 2684624-2685350 bp Feature: domain Description: HipA_C Location: 2684624-2685350 bp Feature: gene Location: 2685427-2685750 bp Ori: PNM96577.1 Feature: domain Description: HTH_XRE Location: 2685469-2685625 bp Feature: domain Description: HTH_XRE Location: 2685469-2685625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_TRD-CR_like (cl38903), RMtype1_S_Eco933I-TRD2-CR2_like (cd17253), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG2, Couple_hipA (pfam13657), HipA_C (pfam07804), HTH_XRE (smart00530)