myRT

myRT report for GCA_001471585.2_ASM147158v2

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Seq: LOSL02000002.1 Vibrio cholerae strain FDAARGOS_103 scf7180000000005_quiver_pilon, whole genome shotgun sequence (1134020 bp)
Overview 1 RT 1: 340251-345544 bp Neighborhood of RT #1 [340251, 345714] HTH_1 PBP2_DntR_like_3 PRK07578 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 340251-341144 bp Ori: PNM39907.1 Feature: domain Description: HTH_1 Location: 340278-340452 bp Feature: domain Description: HTH_1 Location: 340278-340452 bp Feature: domain Description: PBP2_DntR_like_3 Location: 340548-341130 bp Feature: domain Description: PBP2_DntR_like_3 Location: 340548-341 1 30 bp Feature: gene Location: 341280-341885 bp Ori: PNM39908.1 Feature: domain Description: PRK07578 Location: 341289-341877 bp Feature: domain Description: PRK07578 Location: 341 289-341 877 bp Feature: gene Location: 342392-343336 bp Ori: PNM39909.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 342491-343088 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 342491 -343088 bp Feature: gene Location: 343317-344954 bp Ori: PNM39910.1 Feature: domain Description: COG3950 Location: 343512-344892 bp Feature: domain Description: COG3950 Location: 34351 2-344892 bp Feature: gene Location: 344911-345714 bp Ori: PNM39911.1 Feature: domain Description: TIGR02646 Location: 345016-345544 bp Feature: domain Description: TIGR02646 Location: 34501 6-345544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_DntR_like_3 (cd08461), PRK07578 (short chain dehydrogenase; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)