myRT

myRT report for GCA_001472575.1_SMART_610.v1

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Seq: LPPN01000078.1 Enterobacter hormaechei subsp. steigerwaltii strain SMART_610 contig8, whole genome shotgun sequence (64979 bp)
Overview 1 RT 1: 16352-23198 bp Neighborhood of RT #1 [16352, 23206] Pox_D5 PRK09678 RVT-UG3 RVT-UG8 PRK09692 SmpB Feature: gene Location: 16352-16543 bp Ori: KTI63584.1 Feature: domain Description: Pox_D5 Location: 16355-16517 bp Feature: domain Description: Pox_D5 Location: 1 6355-1 651 7 bp Feature: gene Location: 16844-17062 bp Ori: KTI63585.1 Feature: domain Description: PRK09678 Location: 16847-17036 bp Feature: domain Description: PRK09678 Location: 1 6847-1 7036 bp Feature: gene Location: 17525-18787 bp Ori: KTI63586.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 17810-18308 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 781 0-1 8308 bp Feature: gene Location: 18780-20732 bp Ori: KTI63587.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 19305-19761 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 9305-1 9761 bp Feature: gene Location: 20880-22076 bp Ori: KTI63588.1 Feature: domain Description: PRK09692 Location: 20883-22062 bp Feature: domain Description: PRK09692 Location: 20883-22062 bp Feature: gene Location: 22724-23206 bp Ori: KTI63589.1 Gene: smpB Feature: domain Description: SmpB Location: 22754-23198 bp Feature: domain Description: SmpB Location: 22754-231 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pox_D5 (pfam03288), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PRK09692 (Integrase; provisional), SmpB (pfam01668)

Seq: LPPN01000025.1 Enterobacter hormaechei subsp. steigerwaltii strain SMART_610 contig31, whole genome shotgun sequence (3980 bp)
Overview 1 RT 1: 139-3886 bp Neighborhood of RT #1 [139, 3897] EmrE PRK13746 RVT-GII GIIM Aminoglyc_resit Feature: gene Location: 139-456 bp Ori: KTI69766.1 Feature: domain Description: EmrE Location: 142-451 bp Feature: domain Description: EmrE Location: 142 -451 bp Feature: gene Location: 490-1335 bp Ori: KTI69767.1 Feature: domain Description: PRK13746 Location: 493-1270 bp Feature: domain Description: PRK13746 Location: 493-12 70 bp Feature: gene Location: 1939-3294 bp Ori: KTI69768.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2233-2857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 33-2 857 bp Feature: domain Description: GIIM Note: maturase Location: 2896-3115 bp Feature: domain Description: GIIM Note: maturase Location: 2 896-3115 bp Feature: gene Location: 3364-3897 bp Ori: KTI69769.1 Feature: domain Description: Aminoglyc_resit Location: 3367-3886 bp Feature: domain Description: Aminoglyc_resit Location: 3367-3886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EmrE (pfam13536), PRK13746 (aminoglycoside resistance protein; Provisional), RVT-GII, GIIM (pfam08388), Aminoglyc_resit (pfam10706)