myRT

myRT report for GCA_001472755.1_SMART_774.v1

Download annotations/find similar RTs

Seq: LPPD01000022.1 Klebsiella aerogenes strain SMART_774 contig29, whole genome shotgun sequence (58554 bp)
Overview 1 RT 1: 6192-9937 bp Neighborhood of RT #1 [6192, 9939] PRK10276 RVT-GII Antirestrict Feature: gene Location: 6192-6617 bp Ori: KTI23098.1 Feature: domain Description: PRK10276 Location: 6195-6603 bp Feature: domain Description: PRK1 0276 Location: 61 95-6603 bp Feature: gene Location: 6810-7022 bp Feature: gene Location: 7022-8530 bp Ori: KTI23100.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7424-8138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7424-81 38 bp Feature: gene Location: 8764-8994 bp Feature: gene Location: 9514-9939 bp Ori: KTI23102.1 Feature: domain Description: Antirestrict Location: 9649-9937 bp Feature: domain Description: Antirestrict Location: 9649-9937 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: LPPD01000008.1 Klebsiella aerogenes strain SMART_774 contig16, whole genome shotgun sequence (167773 bp)
Overview 1 RT 1: 131887-139617 bp Neighborhood of RT #1 [131887, 139640] Peptidase_M78 IncA RVT-UG5 PRK04247 HsdS RMtype1_S_EcoKI-TRD2-CR2_like RMtype1_S_EcoKI-TRD2-CR2_like Feature: gene Location: 131887-132432 bp Ori: KTI27271.1 Feature: domain Description: Peptidase_M78 Location: 132037-132400 bp Feature: domain Description: Peptidase_M78 Location: 132 037-132 400 bp Feature: gene Location: 132435-133109 bp Ori: KTI27272.1 Feature: domain Description: IncA Location: 132726-133068 bp Feature: domain Description: IncA Location: 132 72 6-133068 bp Feature: gene Location: 133557-136565 bp Ori: KTI27273.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 134046-134541 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 134046-134541 bp Feature: gene Location: 136745-137845 bp Ori: KTI27274.1 Feature: domain Description: PRK04247 Location: 136811-137039 bp Feature: domain Description: PRK042 47 Location: 136811-137039 bp Feature: gene Location: 137856-139640 bp Ori: KTI27275.1 Feature: domain Description: HsdS Location: 137871-138195 bp Feature: domain Description: HsdS Location: 137871-138195 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 138462-138726 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2 -CR2 _like Location: 138462 -13872 6 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2-CR2_like Location: 139038-139617 bp Feature: domain Description: RMtype1_S_EcoKI-TRD2 -CR2 _like Location: 139038-139617 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M78 (pfam06114), IncA, RVT-UG5, PRK04247 (endonuclease NucS), HsdS (COG0732), RMtype1_S_EcoKI-TRD2-CR2_like (cd17261)