myRT

myRT report for GCA_001472845.1_SMART_855.v1

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Seq: LPOY01000092.1 Enterobacter cloacae subsp. cloacae strain SMART_855 contig91, whole genome shotgun sequence (13119 bp)
Overview 1 RT 1: 324-6258 bp Neighborhood of RT #1 [324, 6266] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 324-755 bp Feature: gene Location: 1235-2200 bp Ori: KTH90144.1 Feature: domain Description: ArdC Location: 1361-2195 bp Feature: domain Description: ArdC Location: 1 361 -21 95 bp Feature: gene Location: 2670-4154 bp Ori: KTH90145.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3072-3762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3072-3762 bp Feature: gene Location: 4564-4995 bp Ori: KTH90146.1 Feature: domain Description: PRK10276 Location: 4615-4978 bp Feature: domain Description: PRK1 0276 Location: 461 5-4978 bp Feature: gene Location: 4995-6266 bp Ori: KTH90147.1 Feature: domain Description: umuC Location: 4998-6258 bp Feature: domain Description: umuC Location: 4998-6258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: LPOY01000051.1 Enterobacter cloacae subsp. cloacae strain SMART_855 contig54, whole genome shotgun sequence (25845 bp)
Overview 1 RT 1: 24034-25635 bp Neighborhood of RT #1 [24034, 25790] HicB SLATT_5 RVT-UG3 Feature: gene Location: 24034-24225 bp Ori: KTH94580.1 Feature: domain Description: HicB Location: 24082-24181 bp Feature: domain Description: HicB Location: 2 4082 -2 4181 bp Feature: gene Location: 24248-24841 bp Ori: KTH94577.1 Feature: domain Description: SLATT_5 Location: 24269-24836 bp Feature: domain Description: SLATT_5 Location: 2 42 69-2 4836 bp Feature: gene Location: 24891-25790 bp Ori: KTH94578.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 25179-25635 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 5179-2 5635 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HicB (pfam05534), SLATT_5 (pfam18160), RVT-UG3