myRT

myRT report for GCA_001472995.1_SMART_930.v1

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Seq: LPOS01000052.1 Enterobacter cloacae complex sp. SMART_930 contig56, whole genome shotgun sequence (7828 bp)
Overview 1 RT 1: 146-4588 bp Neighborhood of RT #1 [146, 4596] PHA02517 RVT-GII GIIM COG3547 PHA02517 Feature: gene Location: 146-571 bp Ori: KTH62858.1 Feature: domain Description: PHA02517 Location: 170-506 bp Feature: domain Description: PHA0251 7 Location: 1 70-506 bp Feature: gene Location: 1178-2686 bp Ori: KTH62865.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1436-2168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 436-21 68 bp Feature: domain Description: GIIM Note: maturase Location: 2243-2441 bp Feature: domain Description: GIIM Note: maturase Location: 2243-2441 bp Feature: gene Location: 3228-4304 bp Ori: KTH62859.1 Feature: domain Description: COG3547 Location: 3267-4188 bp Feature: domain Description: COG3547 Location: 3267-41 88 bp Feature: gene Location: 4387-4596 bp Ori: KTH62860.1 Feature: domain Description: PHA02517 Location: 4390-4588 bp Feature: domain Description: PHA0251 7 Location: 4390-4588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: LPOS01000067.1 Enterobacter cloacae complex sp. SMART_930 contig7, whole genome shotgun sequence (449481 bp)
Overview 1 RT 1: 401958-409852 bp Neighborhood of RT #1 [401958, 409857] RVT-UG7 proA proB Feature: gene Location: 401958-402503 bp Feature: gene Location: 403283-404023 bp Feature: gene Location: 404020-405648 bp Ori: KTH60571.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 404434-404857 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 404434-404857 bp Feature: gene Location: 407489-408742 bp Ori: KTH60572.1 Feature: domain Description: proA Location: 407516-408707 bp Feature: domain Description: proA Location: 407516-408707 bp Feature: gene Location: 408754-409857 bp Ori: KTH60573.1 Feature: domain Description: proB Location: 408769-409852 bp Feature: domain Description: proB Location: 408769-409852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, proA (TIGR00407), proB (TIGR01027)

Seq: LPOS01000015.1 Enterobacter cloacae complex sp. SMART_930 contig22, whole genome shotgun sequence (89299 bp)
Overview 1 RT 1: 86631-89078 bp Neighborhood of RT #1 [86631, 89299] ghrA PHA02517 RVT-GII GIIM Feature: gene Location: 86631-87569 bp Ori: KTH70017.1 Gene: ghrA Feature: domain Description: ghrA Location: 86634-87567 bp Feature: domain Description: ghrA Location: 8663 4-87567 bp Feature: gene Location: 87708-88184 bp Feature: domain Description: PHA02517 Location: 87711-88176 bp Feature: domain Description: PHA02517 Location: 87711-88176 bp Feature: gene Location: 88265-89299 bp Ori: KTH70018.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88268-88781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88268-88781 bp Feature: domain Description: GIIM Note: maturase Location: 88856-89078 bp Feature: domain Description: GIIM Note: maturase Location: 88856-89078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ghrA (PRK15469), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: LPOS01000072.1 Enterobacter cloacae complex sp. SMART_930 contig74, whole genome shotgun sequence (1222 bp)
Overview 1 RT 1: 1-544 bp Neighborhood of RT #1 [1, 551] RVT-GII Feature: gene Location: 1-551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-54 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII